RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 XRN1Q8IZH2 1706 aaKnown RBP13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 CBFA2T2O43439 604 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 N4BP1O75113 896 aaKnown RBP13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 TAF7LQ5H9L4 462 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 EXOC4Q96A65 974 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 MPHOSPH8Q99549 860 aa13.32□□□□□ -0.28
HMGCS1-202ENST00000433297 PFKFB1P16118 471 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 MAP3K9P80192 1104 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 RTEL1Q9NZ71 1219 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 SBNO1A3KN83 1393 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 KCNJ6P48051 423 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 PSME1Q06323 249 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 PNOCQ13519 176 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 NOM1Q5C9Z4 860 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 KSR2Q6VAB6 950 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
HMGCS1-202ENST00000433297 PDIA3P30101 505 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 OLFM4Q6UX06 510 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 UBXN6Q9BZV1 441 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 ARHGAP6O43182 974 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 RHOXF2BP0C7M4 288 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 NOP2P46087 812 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 MYL5Q02045 173 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 DHX8Q14562 1220 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 USPL1Q5W0Q7 1092 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 KCNG4Q8TDN1 519 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 CPLX3Q8WVH0 158 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 NEUROD6Q96NK8 337 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 RHOXF2Q9BQY4 288 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 MRFAP1Q9Y605 127 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 OVOS2A0A0J9YW53 1432 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 OVOS2Q6IE36 1432 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 PXDNLA1KZ92 1463 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 TXLNAP40222 546 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 SYKP43405 635 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 JAKMIP3Q5VZ66 844 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 ATL3Q6DD88 541 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 DRC1Q96MC2 740 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 DBNLQ9UJU6 430 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 FAN1Q9Y2M0 1017 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 KDRP35968 1356 aa13.3□□□□□ -0.28
HMGCS1-202ENST00000433297 HOXC9P31274 260 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 TFCP2Q12800 502 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 RABGGTAQ92696 567 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 A0A1W2PQ27 194 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 A0A1W2PQ64 194 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 A0A1W2PQD8 194 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 CPLX1O14810 134 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 HAND2P61296 217 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 VSTM4Q8IW00 320 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 DBNDD2Q9BQY9 259 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 CARMIL3Q8ND23 1372 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 FDPSP14324 419 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 MYL6BP14649 208 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 CHMP4BP1P59074 171 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 SNRKQ9NRH2 765 aa13.29□□□□□ -0.28
HMGCS1-202ENST00000433297 USP6P35125 1406 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 GOLIM4O00461 696 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 MTF1Q14872 753 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 TTC31Q49AM3 519 aaPredicted RBP13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 HSP90B2PQ58FF3 399 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 GPATCH11Q8N954 259 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 HSD3B7Q9H2F3 369 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 PLEKHG3A1L390 1219 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 MYSM1Q5VVJ2 828 aa13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 RSRC2Q7L4I2 434 aaKnown RBP13.28□□□□□ -0.28
HMGCS1-202ENST00000433297 PEAK1Q9H792 1746 aa13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 E7EWF7 191 aa13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 WDHD1O75717 1129 aaPredicted RBP13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 TFRCP02786 760 aaKnown RBP13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 SLC26A8Q96RN1 970 aa13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 SPECC1Q5M775 1068 aa13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 ICE2Q659A1 982 aa13.27□□□□□ -0.28
HMGCS1-202ENST00000433297 ROBO2Q9HCK4 1378 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 A0A1B0GUL7 405 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 CCDC151A5D8V7 595 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 IKBKBO14920 756 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 IVLP07476 585 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 ANO1Q5XXA6 986 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 HDXQ7Z353 690 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 LINS1Q8NG48 757 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 CLIC6Q96NY7 704 aa13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 RNF216Q9NWF9 866 aaPredicted RBP13.27□□□□□ -0.29
HMGCS1-202ENST00000433297 LOC102724159A0A0B4J2E5 919 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 PWP2Q15269 919 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 ABCB6Q9NP58 842 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 BABAM1Q9NWV8 329 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 ZNF609O15014 1411 aa13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 EIF3JO75822 258 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 SART3Q15020 963 aaKnown RBP13.26□□□□□ -0.29
HMGCS1-202ENST00000433297 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms