RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
CCDC171-202ENST00000432954 EIF2B5Q13144 721 aaKnown RBP12.44□□□□□ -0.42
CCDC171-202ENST00000432954 PARP10Q53GL7 1025 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 CEP85LQ5SZL2 805 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 VPS53Q5VIR6 699 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 SPATS2Q86XZ4 545 aaKnown RBP12.44□□□□□ -0.42
CCDC171-202ENST00000432954 TRIM58Q8NG06 486 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 DNAI1Q9UI46 699 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 SPO11Q9Y5K1 396 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
CCDC171-202ENST00000432954 ANKRD62A6NC57 917 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 TRIM64CA6NLI5 447 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 LMNB1P20700 586 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 GBP2P32456 591 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-202ENST00000432954 SLC39A3Q9BRY0 314 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 VPS18Q9P253 973 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 MYBBP1AQ9BQG0 1328 aaKnown RBP12.43□□□□□ -0.42
CCDC171-202ENST00000432954 TOP2BQ02880 1626 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 CCDC159P0C7I6 412 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 PSMD7P51665 324 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 POU5F1Q01860 360 aaKnown RBP12.43□□□□□ -0.42
CCDC171-202ENST00000432954 CEP57L1Q8IYX8 460 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 CLASRPQ8N2M8 674 aaKnown RBP12.43□□□□□ -0.42
CCDC171-202ENST00000432954 DHTKD1Q96HY7 919 aaPredicted RBP12.43□□□□□ -0.42
CCDC171-202ENST00000432954 SLC7A5P2Q9GIP4 190 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
CCDC171-202ENST00000432954 KLC4Q9NSK0 619 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 CROTQ9UKG9 612 aa12.43□□□□□ -0.42
CCDC171-202ENST00000432954 ATP10AO60312 1499 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
CCDC171-202ENST00000432954 SMTNP53814 917 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 PHEXP78562 749 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 SLMAPQ14BN4 828 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 RCN1Q15293 331 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ZSCAN25Q6NSZ9 544 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-202ENST00000432954 APLFQ8IW19 511 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-202ENST00000432954 UBXN4Q92575 508 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 DDX12PQ92771 950 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ARFGAP3Q9NP61 516 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 CAPN7Q9Y6W3 813 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 KIF15Q9NS87 1388 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ZNF608Q9ULD9 1512 aaPredicted RBP12.42□□□□□ -0.42
CCDC171-202ENST00000432954 SENP3-EIF4A1A0A087X0R7 540 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 EBAG9O00559 213 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 NEMFO60524 1076 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ABL1P00519 1130 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 RPSAP08865 295 aaKnown RBP12.42□□□□□ -0.42
CCDC171-202ENST00000432954 SLC8A1P32418 973 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 DZIP1Q86YF9 867 aaKnown RBP12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ZWILCHQ9H900 591 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 ATP6V0A2Q9Y487 856 aa12.42□□□□□ -0.42
CCDC171-202ENST00000432954 MTRF1O75570 445 aaKnown RBP12.41□□□□□ -0.42
CCDC171-202ENST00000432954 ALOX15P16050 662 aaPredicted RBP12.41□□□□□ -0.42
CCDC171-202ENST00000432954 NEK2P51955 445 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 ATP2B2Q01814 1243 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 NUGGCQ68CJ6 796 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 HOOK3Q86VS8 718 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 USP33Q8TEY7 942 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 CLUAP1Q96AJ1 413 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
CCDC171-202ENST00000432954 CAPS2Q9BXY5 557 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 SWAP70Q9UH65 585 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
CCDC171-202ENST00000432954 TSPY4P0CV99 314 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 TSPY10P0CW01 314 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 IDO1P14902 403 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 APOBRQ0VD83 1088 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 CCDC38Q502W7 563 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 KANK4Q5T7N3 995 aaPredicted RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 ATF7IPQ6VMQ6 1270 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 UBE2Q1Q7Z7E8 422 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 SYCP3Q8IZU3 236 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 GABPB2Q8TAK5 448 aaPredicted RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 LZICQ8WZA0 190 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 OSBPL10Q9BXB5 764 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 TRMT1Q9NXH9 659 aaKnown RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 SEL1LQ9UBV2 794 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 TMED5Q9Y3A6 229 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 UACAQ9BZF9 1416 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 AP5Z1O43299 807 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 RAB11FIP3O75154 756 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 RASSF9O75901 435 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 PENKP01210 267 aaPredicted RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 DYNC1I2Q13409 638 aaKnown RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 IRF5Q13568 498 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 WHAMMQ8TF30 809 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 LRRCC1Q9C099 1032 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 PCDH18Q9HCL0 1135 aa12.4□□□□□ -0.42
CCDC171-202ENST00000432954 TFIP11Q9UBB9 837 aaKnown RBP12.4□□□□□ -0.42
CCDC171-202ENST00000432954 TMEM110-MUSTN1A8MSY1 372 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 EFCAB8A8MWE9 144 aa12.39□□□□□ -0.43
CCDC171-202ENST00000432954 B4DLN1 442 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms