RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 EP400Q96L91 3159 aa23.25■■□□□ 1.31
VRK2-205ENST00000432057 PDE6AP16499 860 aa23.25■■□□□ 1.31
VRK2-205ENST00000432057 SYT1P21579 422 aa23.25■■□□□ 1.31
VRK2-205ENST00000432057 CELF1Q92879 486 aaKnown RBP23.25■■□□□ 1.31
VRK2-205ENST00000432057 LRRC2Q9BYS8 371 aa23.25■■□□□ 1.31
VRK2-205ENST00000432057 ZNF532Q9HCE3 1301 aa23.25■■□□□ 1.31
VRK2-205ENST00000432057 RFC4P35249 363 aa23.24■■□□□ 1.31
VRK2-205ENST00000432057 UBE3CQ15386 1083 aa23.24■■□□□ 1.31
VRK2-205ENST00000432057 STK3Q13188 491 aa23.24■■□□□ 1.31
VRK2-205ENST00000432057 TRAPPC3LQ5T215 181 aa23.24■■□□□ 1.31
VRK2-205ENST00000432057 BSDC1Q9NW68 430 aaPredicted RBP23.24■■□□□ 1.31
VRK2-205ENST00000432057 DDX49Q9Y6V7 483 aaKnown RBP23.24■■□□□ 1.31
VRK2-205ENST00000432057 TCRBV5S4A2TA0A5A2 114 aa23.23■■□□□ 1.31
VRK2-205ENST00000432057 STX6O43752 255 aa23.23■■□□□ 1.31
VRK2-205ENST00000432057 HMGB1P09429 215 aaKnown RBP23.23■■□□□ 1.31
VRK2-205ENST00000432057 NLRP3Q96P20 1036 aa23.23■■□□□ 1.31
VRK2-205ENST00000432057 CTNNA3Q9UI47 895 aa23.23■■□□□ 1.31
VRK2-205ENST00000432057 PRPF40AO75400 957 aaKnown RBP23.22■■□□□ 1.31
VRK2-205ENST00000432057 HAND2P61296 217 aa23.22■■□□□ 1.31
VRK2-205ENST00000432057 DHX32Q7L7V1 743 aaKnown RBP23.22■■□□□ 1.31
VRK2-205ENST00000432057 FBXO41Q8TF61 875 aa23.22■■□□□ 1.31
VRK2-205ENST00000432057 FGAP02671 866 aa23.22■■□□□ 1.31
VRK2-205ENST00000432057 ZSCAN22P10073 491 aaPredicted RBP23.22■■□□□ 1.31
VRK2-205ENST00000432057 KLHL40Q2TBA0 621 aa23.22■■□□□ 1.31
VRK2-205ENST00000432057 TPTE2Q6XPS3 522 aa23.22■■□□□ 1.31
VRK2-205ENST00000432057 BRF1Q92994 677 aa23.22■■□□□ 1.31
VRK2-205ENST00000432057 WTIPA6NIX2 430 aaPredicted RBP23.21■■□□□ 1.31
VRK2-205ENST00000432057 IMMTQ16891 758 aaKnown RBP23.21■■□□□ 1.31
VRK2-205ENST00000432057 FOXD4L6Q3SYB3 417 aaPredicted RBP23.21■■□□□ 1.31
VRK2-205ENST00000432057 FOXD4L3Q6VB84 417 aaPredicted RBP23.21■■□□□ 1.31
VRK2-205ENST00000432057 KRT27Q7Z3Y8 459 aa23.21■■□□□ 1.31
VRK2-205ENST00000432057 MINPP1Q9UNW1 487 aa23.21■■□□□ 1.31
VRK2-205ENST00000432057 CARMIL3Q8ND23 1372 aa23.2■■□□□ 1.31
VRK2-205ENST00000432057 RBM6P78332 1123 aaKnown RBP23.2■■□□□ 1.3
VRK2-205ENST00000432057 FGD1P98174 961 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 EXOSC10Q01780 885 aaKnown RBP23.19■■□□□ 1.3
VRK2-205ENST00000432057 MAGEB6Q8N7X4 407 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 GTF3C6Q969F1 213 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 IQSEC3Q9UPP2 1182 aaPredicted RBP23.19■■□□□ 1.3
VRK2-205ENST00000432057 COL1A1P02452 1464 aaPredicted RBP23.19■■□□□ 1.3
VRK2-205ENST00000432057 ZNF804BA4D1E1 1349 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 GYG1P46976 350 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 MAP3K12Q12852 859 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 UBE4AQ14139 1066 aa23.19■■□□□ 1.3
VRK2-205ENST00000432057 NFIXQ14938 502 aa23.18■■□□□ 1.3
VRK2-205ENST00000432057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.17■■□□□ 1.3
VRK2-205ENST00000432057 TRIM37O94972 964 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 F13A1P00488 732 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 RPS8P62241 208 aaKnown RBP23.17■■□□□ 1.3
VRK2-205ENST00000432057 MTMR6Q9Y217 621 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 NPHP1O15259 732 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 ADRA2BP18089 450 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 APOBRQ0VD83 1088 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 CHST3Q7LGC8 479 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 CACNA1SQ13698 1873 aa23.17■■□□□ 1.3
VRK2-205ENST00000432057 GPT2Q8TD30 523 aa23.16■■□□□ 1.3
VRK2-205ENST00000432057 AIDAQ96BJ3 306 aa23.16■■□□□ 1.3
VRK2-205ENST00000432057 AGXT2Q9BYV1 514 aa23.16■■□□□ 1.3
VRK2-205ENST00000432057 FSD2A1L4K1 749 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 VPS37CA5D8V6 355 aaPredicted RBP23.15■■□□□ 1.3
VRK2-205ENST00000432057 NCLP19338 710 aaKnown RBP23.15■■□□□ 1.3
VRK2-205ENST00000432057 STRBPQ96SI9 672 aaKnown RBP23.15■■□□□ 1.3
VRK2-205ENST00000432057 TIAM2Q8IVF5 1701 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 MYH15Q9Y2K3 1946 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 GOLGA6L3A6NEY3 463 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 ZNF213O14771 459 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 MBD4O95243 580 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 NBPF3Q9H094 633 aa23.15■■□□□ 1.3
VRK2-205ENST00000432057 APPP05067 770 aa23.14■■□□□ 1.29
VRK2-205ENST00000432057 TM4SF1P30408 202 aa23.14■■□□□ 1.29
VRK2-205ENST00000432057 SLC27A3Q5K4L6 730 aa23.14■■□□□ 1.29
VRK2-205ENST00000432057 GDPD2Q9HCC8 539 aa23.14■■□□□ 1.29
VRK2-205ENST00000432057 MAST2Q6P0Q8 1798 aa23.14■■□□□ 1.29
VRK2-205ENST00000432057 CCDC88AQ3V6T2 1871 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 JAK2O60674 1132 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 PFKFB2O60825 505 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 SCRN1Q12765 414 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 LARP1BQ659C4 914 aaKnown RBP23.13■■□□□ 1.29
VRK2-205ENST00000432057 MB21D2Q8IYB1 491 aaPredicted RBP23.13■■□□□ 1.29
VRK2-205ENST00000432057 CNBD1Q8NA66 436 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 GNL3LQ9NVN8 582 aaKnown RBP23.13■■□□□ 1.29
VRK2-205ENST00000432057 KLRK1P26718 216 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 CAVIN1Q6NZI2 390 aaKnown RBP23.13■■□□□ 1.29
VRK2-205ENST00000432057 ARMT1Q9H993 441 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 LRP2BPQ9P2M1 347 aa23.13■■□□□ 1.29
VRK2-205ENST00000432057 CAVIN4Q5BKX8 364 aa23.12■■□□□ 1.29
VRK2-205ENST00000432057 L1TD1Q5T7N2 865 aaKnown RBP23.12■■□□□ 1.29
VRK2-205ENST00000432057 FAM84BQ96KN1 310 aaPredicted RBP23.12■■□□□ 1.29
VRK2-205ENST00000432057 EPB41L4AQ9HCS5 686 aaPredicted RBP23.12■■□□□ 1.29
VRK2-205ENST00000432057 CNPY2Q9Y2B0 182 aa23.12■■□□□ 1.29
VRK2-205ENST00000432057 GYS1P13807 737 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 CDC37L1Q7L3B6 337 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 VPS37DQ86XT2 251 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 TBC1D10CQ8IV04 446 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 NCOA7Q8NI08 942 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 GPHNQ9NQX3 736 aaPredicted RBP23.11■■□□□ 1.29
VRK2-205ENST00000432057 NSFL1CQ9UNZ2 370 aaKnown RBP23.11■■□□□ 1.29
VRK2-205ENST00000432057 PRC1O43663 620 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 PDCP20941 246 aa23.11■■□□□ 1.29
VRK2-205ENST00000432057 RALYLQ86SE5 291 aaKnown RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms