RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 CARMIL2Q6F5E8 1435 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 SCNN1AP37088 669 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 KRTAP1-1Q07627 177 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 FKBP5Q13451 457 aaPredicted RBP4.39□□□□□ -1.71
CDC40-204ENST00000431461 PAOXQ6QHF9 649 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 SIAH1Q8IUQ4 282 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 SLC7A3Q8WY07 619 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 PIK3R5Q8WYR1 880 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 FAM84AQ96KN4 292 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 RUSC1Q9BVN2 902 aa4.39□□□□□ -1.71
CDC40-204ENST00000431461 UBAP1LF5GYI3 381 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 KIF4AO95239 1232 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 PTPRAP18433 802 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 CYP27A1Q02318 531 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 C16orf46Q6P387 395 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 STK11IPQ8N1F8 1099 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 TOX2Q96NM4 488 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 SAP130Q9H0E3 1048 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 SUGCTQ9HAC7 445 aa4.38□□□□□ -1.71
CDC40-204ENST00000431461 FNDC3AQ9Y2H6 1198 aaKnown RBP4.38□□□□□ -1.71
CDC40-204ENST00000431461 FAM95CA0A1B0GW59 222 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 A6NJR5 290 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 H3BRJ5 948 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 CYP2E1P05181 493 aaPredicted RBP4.37□□□□□ -1.71
CDC40-204ENST00000431461 CABP4P57796 275 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 SWI5Q1ZZU3 235 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 FAM26DQ5JW98 314 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 CFAP70Q5T0N1 1121 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 TTC39BQ5VTQ0 682 aaPredicted RBP4.37□□□□□ -1.71
CDC40-204ENST00000431461 ZAR1Q86SH2 424 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 SMG8Q8ND04 991 aaKnown RBP4.37□□□□□ -1.71
CDC40-204ENST00000431461 YIPF2Q9BWQ6 316 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 PBX4Q9BYU1 374 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 CYP4F12Q9HCS2 524 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 SLC5A6Q9Y289 635 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 GTF3C3Q9Y5Q9 886 aa4.37□□□□□ -1.71
CDC40-204ENST00000431461 EIF4EBP3O60516 100 aaPredicted RBP4.36□□□□□ -1.71
CDC40-204ENST00000431461 PSPNO60542 156 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 RFX1P22670 979 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 NFKBIBQ15653 356 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 OCLNQ16625 522 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 DUSP27Q5VZP5 1158 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 NUTM2GQ5VZR2 741 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 CEP120Q8N960 986 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 ZSCAN18Q8TBC5 510 aaPredicted RBP4.36□□□□□ -1.71
CDC40-204ENST00000431461 MISP3Q96FF7 219 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 PRIMPOLQ96LW4 560 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 LRRC4CQ9HCJ2 640 aa4.36□□□□□ -1.71
CDC40-204ENST00000431461 ACIN1Q9UKV3 1341 aaKnown RBP4.36□□□□□ -1.71
CDC40-204ENST00000431461 TNFRSF10BO14763 440 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 TIAF1O95411 115 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 ACPPP15309 386 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 ARL4DP49703 201 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 ZNF792Q3KQV3 632 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 HGSNATQ68CP4 663 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 NCAPG2Q86XI2 1143 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 C12orf50Q8NA57 414 aaPredicted RBP4.35□□□□□ -1.71
CDC40-204ENST00000431461 EZH1Q92800 747 aaPredicted RBP4.35□□□□□ -1.71
CDC40-204ENST00000431461 POP1Q99575 1024 aaKnown RBP4.35□□□□□ -1.71
CDC40-204ENST00000431461 TMPRSS13Q9BYE2 586 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 ZMYND15Q9H091 742 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 ABI2Q9NYB9 513 aaPredicted RBP4.35□□□□□ -1.71
CDC40-204ENST00000431461 FAM53CQ9NYF3 392 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 KANSL3Q9P2N6 904 aa4.35□□□□□ -1.71
CDC40-204ENST00000431461 NOVA2Q9UNW9 492 aaKnown RBP4.35□□□□□ -1.71
CDC40-204ENST00000431461 FAM170BA6NMN3 283 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 PRMT3O60678 531 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 TRPA1O75762 1119 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 ADMP35318 185 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 ZAP70P43403 619 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 FAM69CQ0P6D2 419 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 MESP2Q0VG99 397 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 ELOAQ14241 798 aaKnown RBP4.34□□□□□ -1.71
CDC40-204ENST00000431461 PLCL1Q15111 1095 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 CILP2Q8IUL8 1156 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 GLIS3Q8NEA6 775 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 FBLIM1Q8WUP2 373 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 BCL7CQ8WUZ0 217 aaPredicted RBP4.34□□□□□ -1.71
CDC40-204ENST00000431461 FAM168AQ92567 244 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 TBC1D32Q96NH3 1257 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 USP26Q9BXU7 913 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 PRKAG2Q9UGJ0 569 aa4.34□□□□□ -1.71
CDC40-204ENST00000431461 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.34□□□□□ -1.71
CDC40-204ENST00000431461 DRD2P14416 443 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 USP11P51784 963 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 CDCA8Q53HL2 280 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 PDE12Q6L8Q7 609 aaKnown RBP4.33□□□□□ -1.72
CDC40-204ENST00000431461 ZNF574Q6ZN55 896 aaPredicted RBP4.33□□□□□ -1.72
CDC40-204ENST00000431461 GPR152Q8TDT2 470 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 PPP1R16BQ96T49 567 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 STIM2Q9P246 746 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 ZC3H7BQ9UGR2 993 aaKnown RBP4.33□□□□□ -1.72
CDC40-204ENST00000431461 SALL4Q9UJQ4 1053 aa4.33□□□□□ -1.72
CDC40-204ENST00000431461 NFKBIEO00221 500 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 ZBTB39O15060 712 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 RAP1GAPP47736 663 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 C19orf57Q0VDD7 668 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 CDPF1Q6NVV7 123 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 XKR5Q6UX68 686 aa4.32□□□□□ -1.72
CDC40-204ENST00000431461 ABTB2Q8N961 1025 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms