RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 CLMNQ96JQ2 1002 aa28.29■■■□□ 2.12
PTPRA-207ENST00000431048 POTEFA5A3E0 1075 aa28.28■■■□□ 2.12
PTPRA-207ENST00000431048 OTUD7BQ6GQQ9 843 aa28.28■■■□□ 2.12
PTPRA-207ENST00000431048 PTPN22Q9Y2R2 807 aa28.28■■■□□ 2.12
PTPRA-207ENST00000431048 SSC5DA1L4H1 1573 aa28.28■■■□□ 2.12
PTPRA-207ENST00000431048 MYO1BO43795 1136 aa28.27■■■□□ 2.12
PTPRA-207ENST00000431048 HABP4Q5JVS0 413 aaKnown RBP28.27■■■□□ 2.12
PTPRA-207ENST00000431048 G2E3Q7L622 706 aa28.27■■■□□ 2.12
PTPRA-207ENST00000431048 PRKRIP1Q9H875 184 aaPredicted RBP28.27■■■□□ 2.12
PTPRA-207ENST00000431048 MKI67P46013 3256 aaKnown RBP28.27■■■□□ 2.12
PTPRA-207ENST00000431048 TESPA1A2RU30 521 aaPredicted RBP28.26■■■□□ 2.11
PTPRA-207ENST00000431048 SPDYE2BA6NHP3 402 aa28.26■■■□□ 2.11
PTPRA-207ENST00000431048 SPDYE6P0CI01 402 aa28.26■■■□□ 2.11
PTPRA-207ENST00000431048 IL1R1P14778 569 aa28.26■■■□□ 2.11
PTPRA-207ENST00000431048 ARMC5Q96C12 935 aa28.26■■■□□ 2.11
PTPRA-207ENST00000431048 LAMB1P07942 1786 aa28.25■■■□□ 2.11
PTPRA-207ENST00000431048 SLC4A2P04920 1241 aa28.25■■■□□ 2.11
PTPRA-207ENST00000431048 IREB2P48200 963 aaKnown RBP28.25■■■□□ 2.11
PTPRA-207ENST00000431048 CFAP100Q494V2 611 aa28.25■■■□□ 2.11
PTPRA-207ENST00000431048 PRMT6Q96LA8 375 aaPredicted RBP28.25■■■□□ 2.11
PTPRA-207ENST00000431048 MYH16Q9H6N6 1097 aa28.25■■■□□ 2.11
PTPRA-207ENST00000431048 ANKRD18BA2A2Z9 1011 aa28.24■■■□□ 2.11
PTPRA-207ENST00000431048 USP2O75604 605 aaPredicted RBP28.24■■■□□ 2.11
PTPRA-207ENST00000431048 CRHR2Q13324 411 aa28.23■■■□□ 2.11
PTPRA-207ENST00000431048 NBPF12Q5TAG4 269 aaPredicted RBP28.23■■■□□ 2.11
PTPRA-207ENST00000431048 LINS1Q8NG48 757 aa28.23■■■□□ 2.11
PTPRA-207ENST00000431048 PCDHAC2Q9Y5I4 1007 aa28.23■■■□□ 2.11
PTPRA-207ENST00000431048 GJA5P36382 358 aa28.22■■■□□ 2.11
PTPRA-207ENST00000431048 TWISTNBQ3B726 338 aaPredicted RBP28.22■■■□□ 2.11
PTPRA-207ENST00000431048 ZNF804AQ7Z570 1209 aa28.22■■■□□ 2.11
PTPRA-207ENST00000431048 ANKRD13AQ8IZ07 590 aa28.22■■■□□ 2.11
PTPRA-207ENST00000431048 CD99L2Q8TCZ2 262 aa28.22■■■□□ 2.11
PTPRA-207ENST00000431048 TSR2Q969E8 191 aaKnown RBP28.22■■■□□ 2.11
PTPRA-207ENST00000431048 EFCC1Q9HA90 598 aa28.22■■■□□ 2.11
PTPRA-207ENST00000431048 CLRN2A0PK11 232 aa28.21■■■□□ 2.11
PTPRA-207ENST00000431048 SNAP23O00161 211 aa28.21■■■□□ 2.11
PTPRA-207ENST00000431048 TAF5LO75529 589 aa28.21■■■□□ 2.11
PTPRA-207ENST00000431048 SP3Q02447 781 aa28.21■■■□□ 2.11
PTPRA-207ENST00000431048 PTPN18Q99952 460 aa28.21■■■□□ 2.11
PTPRA-207ENST00000431048 KIAA0100Q14667 2235 aaKnown RBP28.2■■■□□ 2.11
PTPRA-207ENST00000431048 FLIIQ13045 1269 aa28.2■■■□□ 2.1
PTPRA-207ENST00000431048 CCDC27Q2M243 656 aa28.2■■■□□ 2.1
PTPRA-207ENST00000431048 DNAAF4Q8WXU2 420 aa28.2■■■□□ 2.1
PTPRA-207ENST00000431048 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.2■■■□□ 2.1
PTPRA-207ENST00000431048 ECM29Q5VYK3 1845 aa28.2■■■□□ 2.1
PTPRA-207ENST00000431048 CENPFP49454 3210 aa28.2■■■□□ 2.1
PTPRA-207ENST00000431048 F8W031 263 aaPredicted RBP28.19■■■□□ 2.1
PTPRA-207ENST00000431048 RASA3Q14644 834 aa28.19■■■□□ 2.1
PTPRA-207ENST00000431048 HELBQ8NG08 1087 aaPredicted RBP28.19■■■□□ 2.1
PTPRA-207ENST00000431048 VEZTQ9HBM0 779 aa28.19■■■□□ 2.1
PTPRA-207ENST00000431048 RBBP6Q7Z6E9 1792 aaKnown RBP28.19■■■□□ 2.1
PTPRA-207ENST00000431048 IFIT5Q13325 482 aaKnown RBP28.18■■■□□ 2.1
PTPRA-207ENST00000431048 EN2P19622 333 aaPredicted RBP28.17■■■□□ 2.1
PTPRA-207ENST00000431048 FOXO4P98177 505 aa28.17■■■□□ 2.1
PTPRA-207ENST00000431048 AOX1Q06278 1338 aa28.17■■■□□ 2.1
PTPRA-207ENST00000431048 MS4A4AQ96JQ5 239 aa28.16■■■□□ 2.1
PTPRA-207ENST00000431048 FAM205AQ6ZU69 1335 aa28.16■■■□□ 2.1
PTPRA-207ENST00000431048 FKBP5Q13451 457 aaPredicted RBP28.15■■■□□ 2.1
PTPRA-207ENST00000431048 TNFAIP1Q13829 316 aa28.15■■■□□ 2.1
PTPRA-207ENST00000431048 ARHGEF6Q15052 776 aa28.15■■■□□ 2.1
PTPRA-207ENST00000431048 CAP1Q01518 475 aa28.14■■■□□ 2.1
PTPRA-207ENST00000431048 SPDYE2Q495Y8 402 aa28.14■■■□□ 2.1
PTPRA-207ENST00000431048 WWC1Q8IX03 1113 aa28.14■■■□□ 2.1
PTPRA-207ENST00000431048 OPTNQ96CV9 577 aa28.14■■■□□ 2.1
PTPRA-207ENST00000431048 TMEM106CQ9BVX2 250 aa28.14■■■□□ 2.1
PTPRA-207ENST00000431048 IL16Q14005 1332 aa28.14■■■□□ 2.09
PTPRA-207ENST00000431048 RBM5P52756 815 aaKnown RBP eCLIP28.13■■■□□ 2.09
PTPRA-207ENST00000431048 ZNF333Q96JL9 665 aa28.13■■■□□ 2.09
PTPRA-207ENST00000431048 ZNF70Q9UC06 446 aaPredicted RBP28.13■■■□□ 2.09
PTPRA-207ENST00000431048 SERPINA10Q9UK55 444 aa28.13■■■□□ 2.09
PTPRA-207ENST00000431048 NCBP3Q53F19 620 aaKnown RBP28.12■■■□□ 2.09
PTPRA-207ENST00000431048 ELP3Q9H9T3 547 aa28.12■■■□□ 2.09
PTPRA-207ENST00000431048 NBPF11Q86T75 865 aa28.11■■■□□ 2.09
PTPRA-207ENST00000431048 TEPSINQ96N21 525 aa28.11■■■□□ 2.09
PTPRA-207ENST00000431048 BRCA2P51587 3418 aa28.11■■■□□ 2.09
PTPRA-207ENST00000431048 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.1■■■□□ 2.09
PTPRA-207ENST00000431048 TDRD7Q8NHU6 1098 aaKnown RBP28.1■■■□□ 2.09
PTPRA-207ENST00000431048 BRI3BPQ8WY22 251 aa28.1■■■□□ 2.09
PTPRA-207ENST00000431048 ZFYVE28Q9HCC9 887 aa28.1■■■□□ 2.09
PTPRA-207ENST00000431048 JAG2Q9Y219 1238 aa28.1■■■□□ 2.09
PTPRA-207ENST00000431048 GTF2A2P52657 109 aa28.09■■■□□ 2.09
PTPRA-207ENST00000431048 MAP3K9P80192 1104 aa28.09■■■□□ 2.09
PTPRA-207ENST00000431048 LDHAL6AQ6ZMR3 332 aa28.09■■■□□ 2.09
PTPRA-207ENST00000431048 CHMP3Q9Y3E7 222 aa28.09■■■□□ 2.09
PTPRA-207ENST00000431048 FXR1P51114 621 aaKnown RBP eCLIP28.08■■■□□ 2.09
PTPRA-207ENST00000431048 CCDC57Q2TAC2 916 aa28.08■■■□□ 2.09
PTPRA-207ENST00000431048 BEND3Q5T5X7 828 aa28.08■■■□□ 2.09
PTPRA-207ENST00000431048 LMBR1LQ6UX01 489 aa28.08■■■□□ 2.09
PTPRA-207ENST00000431048 TDRD3Q9H7E2 651 aaKnown RBP28.08■■■□□ 2.09
PTPRA-207ENST00000431048 TTF2Q9UNY4 1162 aaKnown RBP28.08■■■□□ 2.09
PTPRA-207ENST00000431048 A0A1B0GUL6 1792 aa28.07■■■□□ 2.08
PTPRA-207ENST00000431048 UBE4AQ14139 1066 aa28.07■■■□□ 2.08
PTPRA-207ENST00000431048 TAF1CQ15572 869 aaPredicted RBP28.07■■■□□ 2.08
PTPRA-207ENST00000431048 MFSD14BQ5SR56 506 aa28.07■■■□□ 2.08
PTPRA-207ENST00000431048 DZIP1LQ8IYY4 767 aaKnown RBP28.07■■■□□ 2.08
PTPRA-207ENST00000431048 CACNA1FO60840 1977 aa28.07■■■□□ 2.08
PTPRA-207ENST00000431048 CCL15-CCL14A0A0B4J2E2 113 aa28.06■■■□□ 2.08
PTPRA-207ENST00000431048 VAMP4O75379 141 aa28.06■■■□□ 2.08
PTPRA-207ENST00000431048 CCL15Q16663 113 aa28.06■■■□□ 2.08
PTPRA-207ENST00000431048 SLC9C1Q4G0N8 1177 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms