RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 GLRX3O76003 335 aaKnown RBP23.7■■□□□ 1.38
PTCD1-203ENST00000430029 DCAF8Q5TAQ9 597 aa23.7■■□□□ 1.38
PTCD1-203ENST00000430029 KCNQ5Q9NR82 932 aa23.7■■□□□ 1.38
PTCD1-203ENST00000430029 SEMA3EO15041 775 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 ERC2O15083 957 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 LMNB1P20700 586 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 ZAP70P43403 619 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 PODNQ7Z5L7 613 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 NIM1KQ8IY84 436 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 HAUS7Q99871 368 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 JAG2Q9Y219 1238 aa23.69■■□□□ 1.38
PTCD1-203ENST00000430029 SPATA5Q8NB90 893 aa23.68■■□□□ 1.38
PTCD1-203ENST00000430029 DENND2AQ9ULE3 1009 aa23.68■■□□□ 1.38
PTCD1-203ENST00000430029 MYH13Q9UKX3 1938 aa23.68■■□□□ 1.38
PTCD1-203ENST00000430029 DICER1Q9UPY3 1922 aaKnown RBP23.67■■□□□ 1.38
PTCD1-203ENST00000430029 FRAT2O75474 233 aaPredicted RBP23.67■■□□□ 1.38
PTCD1-203ENST00000430029 GSPT1P15170 499 aaKnown RBP23.67■■□□□ 1.38
PTCD1-203ENST00000430029 CHAF1AQ13111 956 aaPredicted RBP23.67■■□□□ 1.38
PTCD1-203ENST00000430029 TTC22Q5TAA0 569 aa23.67■■□□□ 1.38
PTCD1-203ENST00000430029 EDC3Q96F86 508 aaKnown RBP23.67■■□□□ 1.38
PTCD1-203ENST00000430029 ZNRF3Q9ULT6 936 aa23.67■■□□□ 1.38
PTCD1-203ENST00000430029 FAM205AQ6ZU69 1335 aa23.66■■□□□ 1.38
PTCD1-203ENST00000430029 MAP4K4O95819 1239 aaPredicted RBP23.66■■□□□ 1.38
PTCD1-203ENST00000430029 GTF2IP78347 998 aa23.66■■□□□ 1.38
PTCD1-203ENST00000430029 JDP2Q8WYK2 163 aa23.66■■□□□ 1.38
PTCD1-203ENST00000430029 DNAJC2Q99543 621 aaKnown RBP23.66■■□□□ 1.38
PTCD1-203ENST00000430029 ANTXR1Q9H6X2 564 aa23.66■■□□□ 1.38
PTCD1-203ENST00000430029 ZNF646O15015 1829 aaPredicted RBP23.66■■□□□ 1.38
PTCD1-203ENST00000430029 PDS5AQ29RF7 1337 aaKnown RBP23.65■■□□□ 1.38
PTCD1-203ENST00000430029 CYP2E1P05181 493 aaPredicted RBP23.65■■□□□ 1.38
PTCD1-203ENST00000430029 C9orf131Q5VYM1 1079 aa23.65■■□□□ 1.38
PTCD1-203ENST00000430029 FZD9O00144 591 aa23.64■■□□□ 1.37
PTCD1-203ENST00000430029 RNF181Q9P0P0 153 aa23.64■■□□□ 1.37
PTCD1-203ENST00000430029 PSME4Q14997 1843 aa23.63■■□□□ 1.37
PTCD1-203ENST00000430029 GOLIM4O00461 696 aa23.63■■□□□ 1.37
PTCD1-203ENST00000430029 TTLL5Q6EMB2 1281 aa23.63■■□□□ 1.37
PTCD1-203ENST00000430029 TBC1D9Q6ZT07 1266 aa23.63■■□□□ 1.37
PTCD1-203ENST00000430029 MXD3Q9BW11 206 aa23.63■■□□□ 1.37
PTCD1-203ENST00000430029 PIH1D3Q9NQM4 214 aaKnown RBP23.63■■□□□ 1.37
PTCD1-203ENST00000430029 USP17L3A6NCW0 530 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 USP17L4A6NCW7 530 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 RAD17O75943 681 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 CXCL9Q07325 125 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 DACT2Q5SW24 774 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 STRIP1Q5VSL9 837 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 USP17L1Q7RTZ2 530 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 FBXW7Q969H0 707 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 PAG1Q9NWQ8 432 aa23.62■■□□□ 1.37
PTCD1-203ENST00000430029 GRIK5Q16478 980 aa23.61■■□□□ 1.37
PTCD1-203ENST00000430029 CERS5Q8N5B7 392 aa23.61■■□□□ 1.37
PTCD1-203ENST00000430029 WDR66Q8TBY9 1149 aa23.61■■□□□ 1.37
PTCD1-203ENST00000430029 UTRNP46939 3433 aa23.61■■□□□ 1.37
PTCD1-203ENST00000430029 ZNF541Q9H0D2 1346 aa23.6■■□□□ 1.37
PTCD1-203ENST00000430029 SALL1Q9NSC2 1324 aa23.6■■□□□ 1.37
PTCD1-203ENST00000430029 MYO5AQ9Y4I1 1855 aaKnown RBP23.6■■□□□ 1.37
PTCD1-203ENST00000430029 TIAM2Q8IVF5 1701 aa23.6■■□□□ 1.37
PTCD1-203ENST00000430029 PSMD14O00487 310 aa23.6■■□□□ 1.37
PTCD1-203ENST00000430029 SDSP20132 328 aa23.59■■□□□ 1.37
PTCD1-203ENST00000430029 MFSD14BQ5SR56 506 aa23.59■■□□□ 1.37
PTCD1-203ENST00000430029 TRIM6-TRIM34B2RNG4 842 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 VIL1P09327 827 aaKnown RBP23.58■■□□□ 1.37
PTCD1-203ENST00000430029 BMP2KLQ5H9B9 411 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 CIAPIN1Q6FI81 312 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 TBC1D22AQ8WUA7 517 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 EVI5LQ96CN4 794 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 ABCF2Q9UG63 623 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 DOCK2Q92608 1830 aa23.58■■□□□ 1.37
PTCD1-203ENST00000430029 PRDX5P30044 214 aa23.57■■□□□ 1.36
PTCD1-203ENST00000430029 EIF6P56537 245 aaKnown RBP23.57■■□□□ 1.36
PTCD1-203ENST00000430029 FKBP1AP62942 108 aaKnown RBP23.57■■□□□ 1.36
PTCD1-203ENST00000430029 KBTBD3Q8NAB2 608 aa23.57■■□□□ 1.36
PTCD1-203ENST00000430029 RILPL2Q969X0 211 aa23.57■■□□□ 1.36
PTCD1-203ENST00000430029 TTF1Q15361 905 aaPredicted RBP23.56■■□□□ 1.36
PTCD1-203ENST00000430029 RSBN1LQ6PCB5 846 aaPredicted RBP23.56■■□□□ 1.36
PTCD1-203ENST00000430029 CNTROBQ8N137 903 aa23.56■■□□□ 1.36
PTCD1-203ENST00000430029 CHGBP05060 677 aa23.55■■□□□ 1.36
PTCD1-203ENST00000430029 GMLQ99445 158 aa23.55■■□□□ 1.36
PTCD1-203ENST00000430029 ZBTB12Q9Y330 459 aaPredicted RBP23.55■■□□□ 1.36
PTCD1-203ENST00000430029 IDH1O75874 414 aaKnown RBP23.54■■□□□ 1.36
PTCD1-203ENST00000430029 TNIP1Q15025 636 aa23.54■■□□□ 1.36
PTCD1-203ENST00000430029 ERICH6Q7L0X2 663 aa23.54■■□□□ 1.36
PTCD1-203ENST00000430029 ZGPATQ8N5A5 531 aaKnown RBP23.54■■□□□ 1.36
PTCD1-203ENST00000430029 ZNF384Q8TF68 577 aa23.54■■□□□ 1.36
PTCD1-203ENST00000430029 LRP2BPQ9P2M1 347 aa23.54■■□□□ 1.36
PTCD1-203ENST00000430029 AK9Q5TCS8 1911 aa23.54■■□□□ 1.36
PTCD1-203ENST00000430029 LDHBP07195 334 aaKnown RBP23.53■■□□□ 1.36
PTCD1-203ENST00000430029 SLFNL1Q499Z3 407 aa23.53■■□□□ 1.36
PTCD1-203ENST00000430029 FSD1Q9BTV5 496 aa23.53■■□□□ 1.36
PTCD1-203ENST00000430029 RAI14Q9P0K7 980 aa23.53■■□□□ 1.36
PTCD1-203ENST00000430029 F8W031 263 aaPredicted RBP23.52■■□□□ 1.36
PTCD1-203ENST00000430029 SPTY2D1Q68D10 685 aaPredicted RBP23.52■■□□□ 1.36
PTCD1-203ENST00000430029 SUGT1Q9Y2Z0 365 aa23.52■■□□□ 1.36
PTCD1-203ENST00000430029 GJA3Q9Y6H8 435 aa23.52■■□□□ 1.36
PTCD1-203ENST00000430029 MECOMQ03112 1051 aa23.51■■□□□ 1.35
PTCD1-203ENST00000430029 KIAA0825Q8IV33 1275 aa23.51■■□□□ 1.35
PTCD1-203ENST00000430029 AGBL3Q8NEM8 1001 aa23.51■■□□□ 1.35
PTCD1-203ENST00000430029 NSUN4Q96CB9 384 aaKnown RBP23.51■■□□□ 1.35
PTCD1-203ENST00000430029 MYO3BQ8WXR4 1341 aa23.51■■□□□ 1.35
PTCD1-203ENST00000430029 MYH7P12883 1935 aa23.51■■□□□ 1.35
PTCD1-203ENST00000430029 PDE6AP16499 860 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms