RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 HMG20BQ9P0W2 317 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 DENND2AQ9ULE3 1009 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 JAG2Q9Y219 1238 aa9.62□□□□□ -0.87
HMGA1P4-201ENST00000428643 LTBP3Q9NS15 1303 aa9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 ECE2O60344 883 aa9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 YBX3P16989 372 aaKnown RBP eCLIP9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 SDSP20132 328 aa9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 IARSP41252 1262 aaKnown RBP9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 GPR162Q16538 588 aa9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 EVI5LQ96CN4 794 aa9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 EDC3Q96F86 508 aaKnown RBP9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 FSD1Q9BTV5 496 aa9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 BRCA1P38398 1863 aaKnown RBP9.61□□□□□ -0.87
HMGA1P4-201ENST00000428643 PDS5AQ29RF7 1337 aaKnown RBP9.6□□□□□ -0.87
HMGA1P4-201ENST00000428643 IL1R1P14778 569 aa9.6□□□□□ -0.87
HMGA1P4-201ENST00000428643 TTF1Q15361 905 aaPredicted RBP9.6□□□□□ -0.87
HMGA1P4-201ENST00000428643 TDRD7Q8NHU6 1098 aaKnown RBP9.6□□□□□ -0.87
HMGA1P4-201ENST00000428643 JDP2Q8WYK2 163 aa9.6□□□□□ -0.87
HMGA1P4-201ENST00000428643 PIH1D3Q9NQM4 214 aaKnown RBP9.6□□□□□ -0.87
HMGA1P4-201ENST00000428643 CDC45O75419 566 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 IDH1O75874 414 aaKnown RBP9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 CYP2E1P05181 493 aaPredicted RBP9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 GTF2IP78347 998 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 TBC1D9Q6ZT07 1266 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 PODNQ7Z5L7 613 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 WDR66Q8TBY9 1149 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 VPS33BQ9H267 617 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 ANTXR1Q9H6X2 564 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 DIAPH3Q9NSV4 1193 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 LRP2BPQ9P2M1 347 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 ABCF2Q9UG63 623 aa9.59□□□□□ -0.87
HMGA1P4-201ENST00000428643 UTRNP46939 3433 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 LMNB1P20700 586 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 LRRFIP1Q32MZ4 808 aaKnown RBP9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 MFSD14BQ5SR56 506 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZGPATQ8N5A5 531 aaKnown RBP9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 KBTBD3Q8NAB2 608 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 TBC1D22AQ8WUA7 517 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 RAI14Q9P0K7 980 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZNRF3Q9ULT6 936 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 RFX7Q2KHR2 1363 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 COL4A5P29400 1685 aa9.58□□□□□ -0.88
HMGA1P4-201ENST00000428643 FAM205AQ6ZU69 1335 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 USP17L3A6NCW0 530 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 USP17L4A6NCW7 530 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 GRIN3BO60391 1043 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 RAD17O75943 681 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 MAP3K12Q12852 859 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 SPTY2D1Q68D10 685 aaPredicted RBP9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 TTLL5Q6EMB2 1281 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 USP17L1Q7RTZ2 530 aa9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 DZIP1Q86YF9 867 aaKnown RBP9.57□□□□□ -0.88
HMGA1P4-201ENST00000428643 SALL1Q9NSC2 1324 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 ARFGEF1Q9Y6D6 1849 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 YDJCA8MPS7 323 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 HIP1O00291 1037 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZBTB22O15209 634 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 LDHBP07195 334 aaKnown RBP9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 PDE6AP16499 860 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 PRDX5P30044 214 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 EIF6P56537 245 aaKnown RBP9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 SLC9C2Q5TAH2 1124 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 STRIP1Q5VSL9 837 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZSCAN25Q6NSZ9 544 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 ERICH6Q7L0X2 663 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 MXD3Q9BW11 206 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 KCNQ5Q9NR82 932 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 RNF181Q9P0P0 153 aa9.56□□□□□ -0.88
HMGA1P4-201ENST00000428643 DCAF8L1A6NGE4 600 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 F8W031 263 aaPredicted RBP9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 RNF113AO15541 343 aaKnown RBP9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZFYP08048 801 aaPredicted RBP9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 CHMLP26374 656 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 PRELPP51888 382 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 NMIQ13287 307 aaPredicted RBP9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 DACT2Q5SW24 774 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 C9orf131Q5VYM1 1079 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 CWC27Q6UX04 472 aaKnown RBP9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 MAGEB6Q8N7X4 407 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 ZNF532Q9HCE3 1301 aa9.55□□□□□ -0.88
HMGA1P4-201ENST00000428643 FER1L6Q2WGJ9 1857 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 A0A0D9SFI3 127 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 PSMD14O00487 310 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 CHGBP05060 677 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 CYP7A1P22680 504 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 GSTO1P78417 241 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 MECOMQ03112 1051 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 TNIP1Q15025 636 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 GRIK5Q16478 980 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 C8orf34Q49A92 452 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 CIAPIN1Q6FI81 312 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 NAA16Q6N069 864 aaPredicted RBP9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 RSBN1LQ6PCB5 846 aaPredicted RBP9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 CERS5Q8N5B7 392 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 RUFY2Q8WXA3 655 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 APPBP2Q92624 585 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 FAM227BQ96M60 508 aa9.54□□□□□ -0.88
HMGA1P4-201ENST00000428643 TTF2Q9UNY4 1162 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms