RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 ILDR1Q86SU0 546 aaPredicted RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 CCDC50Q8IVM0 306 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 FNBP1Q96RU3 617 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 ADAMTS8Q9UP79 889 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 PDZRN3Q9UPQ7 1066 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 WASLO00401 505 aaPredicted RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 BMP15O95972 392 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 STAT6P42226 847 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SATB1Q01826 763 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 TRPC3Q13507 836 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 PRPF40BQ6NWY9 871 aaKnown RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 DPP8Q6V1X1 898 aaPredicted RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 GADL1Q6ZQY3 521 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 CHD1LQ86WJ1 897 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 CEP112Q8N8E3 955 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 PTPDC1A2A3K4 754 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 GNAT2P19087 354 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SMTNP53814 917 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SPECC1Q5M775 1068 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 LCA5Q86VQ0 697 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SULF1Q8IWU6 871 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 FAM117AQ9C073 453 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 GGA1Q9UJY5 639 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 EHBP1L1Q8N3D4 1523 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 RAD50Q92878 1312 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 STX10O60499 249 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 UFL1O94874 794 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 TOP1P11387 765 aaKnown RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 ZBTB16Q05516 673 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 SKIV2LQ15477 1246 aaKnown RBP6.48□□□□□ -1.37
HERC4-206ENST00000427635 FAM43AQ8N2R8 423 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 EVI5LQ96CN4 794 aa6.48□□□□□ -1.37
HERC4-206ENST00000427635 ERICH3Q5RHP9 1530 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 MARCKSP29966 332 aaPredicted RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 RASA3Q14644 834 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 AKNAD1Q5T1N1 836 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 NOP9Q86U38 636 aaKnown RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 SGSM3Q96HU1 749 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 SELENOOQ9BVL4 669 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 TMEM110-MUSTN1A8MSY1 372 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 OSBPP22059 807 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 MXRA7P84157 204 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 HLTFQ14527 1009 aaKnown RBP eCLIP6.47□□□□□ -1.372e-6■■■■□ 23.7
HERC4-206ENST00000427635 SH2B1Q9NRF2 756 aaPredicted RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 IQSEC3Q9UPP2 1182 aaPredicted RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 NSD3Q9BZ95 1437 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 GOLGA6L9A6NEM1 432 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 MX1P20591 662 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 CKAP4Q07065 602 aaKnown RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 UBXN4Q92575 508 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 CCDC77Q9BR77 488 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 EXOC7Q9UPT5 735 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 ZFYP08048 801 aaPredicted RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 TNFAIP1Q13829 316 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 MAP3K11Q16584 847 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 TBC1D31Q96DN5 1066 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 FBXO9Q9UK97 447 aaPredicted RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 NCKAP5LQ9HCH0 1330 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 K7ELQ4 463 aaPredicted RBP6.47□□□□□ -1.37
HERC4-206ENST00000427635 GIPC1O14908 333 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 RXRBP28702 533 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 PLCB4Q15147 1175 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 GEN1Q17RS7 908 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 KIF4BQ2VIQ3 1234 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 HS2ST1Q7LGA3 356 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 KIFAP3Q92845 792 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 GINS2Q9Y248 185 aa6.47□□□□□ -1.37
HERC4-206ENST00000427635 PTPRCP08575 1304 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 CCDC141Q6ZP82 1450 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 CTAGE5O15320 804 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 HARSP12081 509 aaKnown RBP6.46□□□□□ -1.37
HERC4-206ENST00000427635 GUCY1B3Q02153 619 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 SEMA3FQ13275 785 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 MICALCLQ6ZW33 695 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 ARMC9Q7Z3E5 817 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 MTERF4Q7Z6M4 381 aaKnown RBP6.46□□□□□ -1.37
HERC4-206ENST00000427635 TRIM47Q96LD4 638 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 MED10Q9BTT4 135 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 ANO3Q9BYT9 981 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 TPX2Q9ULW0 747 aaKnown RBP6.46□□□□□ -1.37
HERC4-206ENST00000427635 KIF14Q15058 1648 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 E7EVH7 732 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 MYCLP12524 364 aaPredicted RBP6.46□□□□□ -1.37
HERC4-206ENST00000427635 CCT6AP40227 531 aaKnown RBP6.46□□□□□ -1.37
HERC4-206ENST00000427635 BRD3Q15059 726 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 SPECC1LQ69YQ0 1117 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 ZNF449Q6P9G9 518 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 DAAM2Q86T65 1068 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 ABI1Q8IZP0 508 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 AFAP1L2Q8N4X5 818 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 GCNAQ96QF7 691 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 USP16Q9Y5T5 823 aa6.46□□□□□ -1.37
HERC4-206ENST00000427635 PCDH11XQ9BZA7 1347 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 PCDH11YQ9BZA8 1340 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 MUM1L1Q5H9M0 696 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 CC2D1AQ6P1N0 951 aaPredicted RBP6.46□□□□□ -1.38
HERC4-206ENST00000427635 TMCO3Q6UWJ1 677 aa6.46□□□□□ -1.38
HERC4-206ENST00000427635 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms