RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 KBTBD3Q8NAB2 608 aa22.48■■□□□ 1.19
HCG18-235ENST00000426882 IL17REQ8NFR9 667 aa22.48■■□□□ 1.19
HCG18-235ENST00000426882 NCOA5Q9HCD5 579 aaKnown RBP22.48■■□□□ 1.19
HCG18-235ENST00000426882 PSMA7O14818 248 aa22.48■■□□□ 1.19
HCG18-235ENST00000426882 SSH3Q8TE77 659 aa22.48■■□□□ 1.19
HCG18-235ENST00000426882 POTEJP0CG39 1038 aa22.47■■□□□ 1.19
HCG18-235ENST00000426882 ZNF496Q96IT1 587 aaPredicted RBP22.47■■□□□ 1.19
HCG18-235ENST00000426882 TMEM2Q9UHN6 1383 aa22.47■■□□□ 1.19
HCG18-235ENST00000426882 GADD45BO75293 160 aaPredicted RBP22.47■■□□□ 1.19
HCG18-235ENST00000426882 A1BGP04217 495 aa22.47■■□□□ 1.19
HCG18-235ENST00000426882 ZKSCAN3Q9BRR0 538 aa22.47■■□□□ 1.19
HCG18-235ENST00000426882 LLPHQ9BRT6 129 aaKnown RBP22.47■■□□□ 1.19
HCG18-235ENST00000426882 CALML3P27482 149 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 MCM9Q9NXL9 1143 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.46■■□□□ 1.19
HCG18-235ENST00000426882 V9GYY5 206 aaPredicted RBP22.46■■□□□ 1.19
HCG18-235ENST00000426882 NAPAP54920 295 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 STX17P56962 302 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 EHBP1Q8NDI1 1231 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 CABP5Q9NP86 173 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 B4E1Z4 1266 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 SLU7O95391 586 aaKnown RBP22.46■■□□□ 1.19
HCG18-235ENST00000426882 ITGA6P23229 1130 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 CETN2P41208 172 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 XAGE2Q96GT9 111 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 TMCO5BA8MYB1 307 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 MYO1BO43795 1136 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 BRD1O95696 1058 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 KRT2P35908 639 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 APPBP2Q92624 585 aa22.46■■□□□ 1.19
HCG18-235ENST00000426882 SHTN1A0MZ66 631 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 ABCA8O94911 1581 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 ASIC1P78348 528 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 KRI1Q8N9T8 703 aaKnown RBP22.45■■□□□ 1.18
HCG18-235ENST00000426882 EHMT1Q9H9B1 1298 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 ST5P78524 1137 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 SAMD9LQ8IVG5 1584 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 GOLGA6L7A0A1B0GV03 622 aa22.45■■□□□ 1.18
HCG18-235ENST00000426882 NOP2P46087 812 aaKnown RBP22.45■■□□□ 1.18
HCG18-235ENST00000426882 TRMT1LQ7Z2T5 733 aaKnown RBP22.45■■□□□ 1.18
HCG18-235ENST00000426882 NAA15Q9BXJ9 866 aaKnown RBP22.45■■□□□ 1.18
HCG18-235ENST00000426882 CYLC1P35663 651 aaPredicted RBP22.45■■□□□ 1.18
HCG18-235ENST00000426882 HLTFQ14527 1009 aaKnown RBP eCLIP22.45■■□□□ 1.188e-7■■□□□ 11.9
HCG18-235ENST00000426882 RNF216Q9NWF9 866 aaPredicted RBP22.45■■□□□ 1.18
HCG18-235ENST00000426882 KCNQ3O43525 872 aa22.44■■□□□ 1.18
HCG18-235ENST00000426882 GTF2F1P35269 517 aaKnown RBP eCLIP22.44■■□□□ 1.181e-8■■■□□ 16.5
HCG18-235ENST00000426882 CETN1Q12798 172 aa22.44■■□□□ 1.18
HCG18-235ENST00000426882 LIG1P18858 919 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 KRT222Q8N1A0 295 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 LEO1Q8WVC0 666 aaPredicted RBP22.43■■□□□ 1.18
HCG18-235ENST00000426882 FEZ1Q99689 392 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 CCDC175P0C221 793 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 TPTE2Q6XPS3 522 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 F8W031 263 aaPredicted RBP22.43■■□□□ 1.18
HCG18-235ENST00000426882 GPAA1O43292 621 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 TUBB4AP04350 444 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 TM6SF1Q9BZW5 370 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 SYNMO15061 1565 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 LTKP29376 864 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 CLSTN2Q9H4D0 955 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 TMEM63CQ9P1W3 806 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 ELP1O95163 1332 aa22.43■■□□□ 1.18
HCG18-235ENST00000426882 ANKRD62A6NC57 917 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 PALD1Q9ULE6 856 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 HSPA2P54652 639 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 MYL5Q02045 173 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 IFFO1Q0D2I5 559 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 OTUD7BQ6GQQ9 843 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 CDC37L1Q7L3B6 337 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 TMEM87BQ96K49 555 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 CCDC113Q9H0I3 377 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 ANGEL1Q9UNK9 670 aaKnown RBP22.42■■□□□ 1.18
HCG18-235ENST00000426882 ZNF622Q969S3 477 aaKnown RBP eCLIP22.42■■□□□ 1.18
HCG18-235ENST00000426882 NYXQ9GZU5 481 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 ARFGAP3Q9NP61 516 aa22.42■■□□□ 1.18
HCG18-235ENST00000426882 MYO5CQ9NQX4 1742 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 CTAGE15A4D2H0 777 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 GIGYF1O75420 1035 aaPredicted RBP22.41■■□□□ 1.18
HCG18-235ENST00000426882 CTAGE8P0CG41 777 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 USP8P40818 1118 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 ANO1Q5XXA6 986 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 CTAGE6Q86UF2 777 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 CTAGE4Q8IX94 777 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 EDC3Q96F86 508 aaKnown RBP22.41■■□□□ 1.18
HCG18-235ENST00000426882 NEO1Q92859 1461 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 MCM7P33993 719 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 SH3TC1Q8TE82 1336 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 TBCAO75347 108 aaKnown RBP22.41■■□□□ 1.18
HCG18-235ENST00000426882 PICALMQ13492 652 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 SPAG5Q96R06 1193 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 C6orf50Q9HD87 102 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 UGGT1Q9NYU2 1555 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 STXBP4Q6ZWJ1 553 aa22.41■■□□□ 1.18
HCG18-235ENST00000426882 KDM5DQ9BY66 1539 aa22.4■■□□□ 1.18
HCG18-235ENST00000426882 JAK2O60674 1132 aa22.4■■□□□ 1.18
HCG18-235ENST00000426882 ZNF804AQ7Z570 1209 aa22.4■■□□□ 1.18
HCG18-235ENST00000426882 CTR9Q6PD62 1173 aa22.4■■□□□ 1.18
HCG18-235ENST00000426882 ERMNQ8TAM6 284 aa22.4■■□□□ 1.18
HCG18-235ENST00000426882 SRRTQ9BXP5 876 aaKnown RBP22.4■■□□□ 1.18
HCG18-235ENST00000426882 CALCOCO1Q9P1Z2 691 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms