RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 IRS4O14654 1257 aaPredicted RBP20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 RXRAP19793 462 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 TYRO3Q06418 890 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 MAP3K1Q13233 1512 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 OPA1O60313 960 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 PLCB3Q01970 1234 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 DDB1Q16531 1140 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 CWF19L2Q2TBE0 894 aaKnown RBP20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 KRT86O43790 486 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 NFATC2IPQ8NCF5 419 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 CCDC42Q96M95 316 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 SELENOSQ9BQE4 189 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
ARHGEF28-203ENST00000426542 GPATCH11Q8N954 259 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 NCBP1Q09161 790 aaKnown RBP20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 KARSQ15046 597 aaKnown RBP20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 PTPDC1A2A3K4 754 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 ATP2A1O14983 1001 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 GOLGA1Q92805 767 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 C8orf37Q96NL8 207 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 STMN4Q9H169 189 aaPredicted RBP20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 ECM2O94769 699 aaPredicted RBP20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 ATRIPQ8WXE1 791 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 GUCA1BQ9UMX6 200 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 JAG2Q9Y219 1238 aa20.3■□□□□ 0.84
ARHGEF28-203ENST00000426542 KDM5BQ9UGL1 1544 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 ZC3H12CQ9C0D7 883 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 PLCG2P16885 1265 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 WWC3Q9ULE0 1092 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 CCDC129Q6ZRS4 1044 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 APBB1IPQ7Z5R6 666 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 RAB3IL1Q8TBN0 382 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 ZRANB1Q9UGI0 708 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 CCDC6Q16204 474 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 TPTE2Q6XPS3 522 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 DDX23Q9BUQ8 820 aaKnown RBP20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 DTHD1Q6ZMT9 781 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 SNX21Q969T3 373 aa20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 ZHX1Q9UKY1 873 aaPredicted RBP20.29■□□□□ 0.84
ARHGEF28-203ENST00000426542 RUFY3Q7L099 469 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 SPATA24Q86W54 205 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 RSPH14Q9UHP6 348 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 NSFL1CQ9UNZ2 370 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 CEP85Q6P2H3 762 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 HS2ST1Q7LGA3 356 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 IL2RBP14784 551 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 LINS1Q8NG48 757 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 LDHBP07195 334 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 CABLES1Q8TDN4 633 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 LZTFL1Q9NQ48 299 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 V9GYY5 206 aaPredicted RBP20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 SMIM23A6NLE4 172 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 B4DLN1 442 aa20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 MRPL12P52815 198 aaKnown RBP20.28■□□□□ 0.84
ARHGEF28-203ENST00000426542 GNA11P29992 359 aa20.27■□□□□ 0.84
ARHGEF28-203ENST00000426542 ZKSCAN3Q9BRR0 538 aa20.27■□□□□ 0.84
ARHGEF28-203ENST00000426542 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
ARHGEF28-203ENST00000426542 NDC80O14777 642 aa20.27■□□□□ 0.84
ARHGEF28-203ENST00000426542 SRRTQ9BXP5 876 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-203ENST00000426542 RTCBQ9Y3I0 505 aaKnown RBP20.27■□□□□ 0.84
ARHGEF28-203ENST00000426542 SP4Q02446 784 aa20.27■□□□□ 0.83
ARHGEF28-203ENST00000426542 PRIM1P49642 420 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 ZNF569Q5MCW4 686 aa20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 IFNKQ9P0W0 207 aa20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 ZBTB9Q96C00 473 aa20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 BICC1Q9H694 974 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 SLU7O95391 586 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 MNAT1P51948 309 aa20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 DHX32Q7L7V1 743 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 PLCD3Q8N3E9 789 aa20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 MSL1Q68DK7 614 aa20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 RBM28Q9NW13 759 aaKnown RBP20.26■□□□□ 0.83
ARHGEF28-203ENST00000426542 BRAPQ7Z569 592 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 TNNQ9UQP3 1299 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 DCAF17Q5H9S7 520 aaPredicted RBP20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 IFT81Q8WYA0 676 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 PARP1P09874 1014 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 ATP6V0A2Q9Y487 856 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 CEP83Q9Y592 693 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 ZBTB16Q05516 673 aa20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 SAP30BPQ9UHR5 308 aaKnown RBP20.25■□□□□ 0.83
ARHGEF28-203ENST00000426542 RAPGEF1Q13905 1077 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 ANKS4BQ8N8V4 417 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 TFCP2L1Q9NZI6 479 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 MSANTD4Q8NCY6 345 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 PPP1R9BQ96SB3 815 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 WDR7Q9Y4E6 1490 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 PPP1R7Q15435 360 aa20.24■□□□□ 0.83
ARHGEF28-203ENST00000426542 CCDC25Q86WR0 208 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 PKD2L1Q9P0L9 805 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 BACH1O14867 736 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 ZNF174Q15697 407 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 CCDC114Q96M63 670 aa20.23■□□□□ 0.83
ARHGEF28-203ENST00000426542 TTC14Q96N46 770 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms