RNA–Protein interactions for RNA: ENST00000426509.1

LINC00407-201, long intergenic non-protein coding RNA 407, humanhuman

TSL 5 BASIC

Gene LINC00407, Length 295 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00407-201ENST00000426509 SCARF1Q14162 830 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 BECN1Q14457 450 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 GPR162Q16538 588 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 MTHFSDQ2M296 383 aaKnown RBP3.41□□□□□ -1.86
LINC00407-201ENST00000426509 BMP2KLQ5H9B9 411 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 FAM196AQ6ZSG2 479 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 LINC00528Q8N1L1 170 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 GCC1Q96CN9 775 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 AGBL1Q96MI9 1066 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 KIF2CQ99661 725 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 C22orf23Q9BZE7 217 aa3.41□□□□□ -1.86
LINC00407-201ENST00000426509 CHMP4BQ9H444 224 aaKnown RBP3.41□□□□□ -1.86
LINC00407-201ENST00000426509 NXF1Q9UBU9 619 aaKnown RBP3.41□□□□□ -1.86
LINC00407-201ENST00000426509 N4BP2Q86UW6 1770 aaPredicted RBP3.4□□□□□ -1.86
LINC00407-201ENST00000426509 H3BM21 787 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SPINT1O43278 529 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 BMP2P12643 396 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 GSPT1P15170 499 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 HOXC9P31274 260 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 DDIT3P35638 169 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 NCAPD2Q15021 1401 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 CHRNA2Q15822 529 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ANKRD45Q5TZF3 282 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 CEP85Q6P2H3 762 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 G2E3Q7L622 706 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ANKRD44Q8N8A2 993 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PNMA1Q8ND90 353 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 GAS2L2Q8NHY3 880 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SNX21Q969T3 373 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ARXQ96QS3 562 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 TSEN34Q9BSV6 310 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SLKQ9H2G2 1235 aaPredicted RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 DCTPP1Q9H773 170 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 UPF2Q9HAU5 1272 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PRM3Q9NNZ6 103 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PGPEP1Q9NXJ5 209 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 DNMT3LQ9UJW3 386 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF330Q9Y3S2 320 aaPredicted RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PHRF1Q9P1Y6 1649 aaKnown RBP3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PTPRCP08575 1304 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 ERBB4Q15303 1308 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 SPATA31A1Q5TZJ5 1347 aa3.4□□□□□ -1.87
LINC00407-201ENST00000426509 PLCH1Q4KWH8 1693 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 SLIT3O75094 1523 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NRAPQ86VF7 1730 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TNS3Q68CZ2 1445 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 LTN1O94822 1766 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 HTATSF1O43719 755 aaKnown RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 CTSOP43234 321 aaPredicted RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 RAB15P59190 212 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 DHX9Q08211 1270 aaKnown RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NBPF20Q3BBV1 942 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TSGA10IPQ3SY00 556 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TTC22Q5TAA0 569 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TBC1D9Q6ZT07 1266 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PLEKHM2Q8IWE5 1019 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NPAS3Q8IXF0 933 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PHTF2Q8N3S3 785 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 JMYQ8N9B5 988 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 NGDNQ8NEJ9 315 aaKnown RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 OTUD7AQ8TE49 926 aaPredicted RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 GLMNQ92990 594 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 MEIS3Q99687 375 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 MIS18AQ9NYP9 233 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TSPYL4Q9UJ04 414 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PCDHB9Q9Y5E1 797 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 PXDNLA1KZ92 1463 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TUBGCP6Q96RT7 1819 aa3.39□□□□□ -1.87
LINC00407-201ENST00000426509 TRPM3Q9HCF6 1732 aaPredicted RBP3.39□□□□□ -1.87
LINC00407-201ENST00000426509 ADCY9O60503 1353 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 MAP3K5Q99683 1374 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 KDM3BQ7LBC6 1761 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 FIGNL2A6NMB9 653 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 TTLL8A6PVC2 850 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 F6X3S4 739 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 PIK3CDO00329 1044 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 SMARCA5O60264 1052 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 MAN1A2O60476 641 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 PPFIA3O75145 1194 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CDC45O75419 566 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 ADH1AP07327 375 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 PTGIRP43119 386 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 AMPHP49418 695 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 RELBQ01201 579 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 SLC15A2Q16348 729 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF827Q17R98 1081 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 WASHC4Q2M389 1173 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 NUTM2GQ5VZR2 741 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 HSCBQ8IWL3 235 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 RPAP2Q8IXW5 612 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 C16orf71Q8IYS4 520 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CCDC82Q8N4S0 544 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 IL17REQ8NFR9 667 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 IP6K1Q92551 441 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 UCN2Q96RP3 112 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 INSM2Q96T92 566 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 MTFR1LQ9H019 292 aa3.38□□□□□ -1.87
LINC00407-201ENST00000426509 ZNF395Q9H8N7 513 aaPredicted RBP3.38□□□□□ -1.87
LINC00407-201ENST00000426509 CYLDQ9NQC7 956 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms