RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
SNX3-204ENST00000426155 GNAI2P04899 355 aa16.99■□□□□ 0.31
SNX3-204ENST00000426155 ZC3H15Q8WU90 426 aaKnown RBP16.99■□□□□ 0.31
SNX3-204ENST00000426155 KLRG1Q96E93 195 aa16.99■□□□□ 0.31
SNX3-204ENST00000426155 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
SNX3-204ENST00000426155 MKRN1Q9UHC7 482 aaKnown RBP16.99■□□□□ 0.31
SNX3-204ENST00000426155 SCAF8Q9UPN6 1271 aaKnown RBP16.99■□□□□ 0.31
SNX3-204ENST00000426155 MYO3BQ8WXR4 1341 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 F8W031 263 aaPredicted RBP16.98■□□□□ 0.31
SNX3-204ENST00000426155 FGFR2P21802 821 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 HIBADHP31937 336 aaKnown RBP16.98■□□□□ 0.31
SNX3-204ENST00000426155 MTX1Q13505 466 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 PUM3Q15397 648 aaKnown RBP16.98■□□□□ 0.31
SNX3-204ENST00000426155 USP48Q86UV5 1035 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
SNX3-204ENST00000426155 CIAO1O76071 339 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 SASH1O94885 1247 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 SCARF1Q14162 830 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 ANGEL2Q5VTE6 544 aaKnown RBP16.97■□□□□ 0.31
SNX3-204ENST00000426155 CST9Q5W186 159 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 TDRD7Q8NHU6 1098 aaKnown RBP16.97■□□□□ 0.31
SNX3-204ENST00000426155 ZNF408Q9H9D4 720 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 COPRSQ9NQ92 184 aa16.97■□□□□ 0.31
SNX3-204ENST00000426155 COL1A1P02452 1464 aaPredicted RBP16.97■□□□□ 0.31
SNX3-204ENST00000426155 BCAMP50895 628 aa16.96■□□□□ 0.31
SNX3-204ENST00000426155 CDC37L1Q7L3B6 337 aa16.96■□□□□ 0.31
SNX3-204ENST00000426155 FBXO33Q7Z6M2 555 aa16.96■□□□□ 0.31
SNX3-204ENST00000426155 PCDHAC2Q9Y5I4 1007 aa16.96■□□□□ 0.31
SNX3-204ENST00000426155 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.96■□□□□ 0.31
SNX3-204ENST00000426155 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
SNX3-204ENST00000426155 ZBTB7BO15156 539 aaPredicted RBP16.95■□□□□ 0.3
SNX3-204ENST00000426155 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
SNX3-204ENST00000426155 ATP2B3Q16720 1220 aa16.95■□□□□ 0.3
SNX3-204ENST00000426155 KRT26Q7Z3Y9 468 aa16.95■□□□□ 0.3
SNX3-204ENST00000426155 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
SNX3-204ENST00000426155 DCPSQ96C86 337 aaKnown RBP16.95■□□□□ 0.3
SNX3-204ENST00000426155 ABT1Q9ULW3 272 aaKnown RBP16.95■□□□□ 0.3
SNX3-204ENST00000426155 FAM205AQ6ZU69 1335 aa16.95■□□□□ 0.3
SNX3-204ENST00000426155 WNT10BO00744 389 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 CELF2O95319 508 aaKnown RBP16.94■□□□□ 0.3
SNX3-204ENST00000426155 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
SNX3-204ENST00000426155 SLC5A1P13866 664 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 IL15P40933 162 aaPredicted RBP16.94■□□□□ 0.3
SNX3-204ENST00000426155 GRIK5Q16478 980 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 CAVIN4Q5BKX8 364 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 OGFOD1Q8N543 542 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 LPIN2Q92539 896 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 CEP126Q9P2H0 1117 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 FBXO3Q9UK99 471 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 AOX1Q06278 1338 aa16.94■□□□□ 0.3
SNX3-204ENST00000426155 ADORA1P30542 326 aa16.93■□□□□ 0.3
SNX3-204ENST00000426155 MFSD14BQ5SR56 506 aa16.93■□□□□ 0.3
SNX3-204ENST00000426155 TFCP2Q12800 502 aa16.92■□□□□ 0.3
SNX3-204ENST00000426155 C20orf194Q5TEA3 1177 aa16.92■□□□□ 0.3
SNX3-204ENST00000426155 JMYQ8N9B5 988 aa16.92■□□□□ 0.3
SNX3-204ENST00000426155 HDAC9Q9UKV0 1011 aa16.92■□□□□ 0.3
SNX3-204ENST00000426155 COG6Q9Y2V7 657 aa16.92■□□□□ 0.3
SNX3-204ENST00000426155 THSD7BQ9C0I4 1608 aa16.92■□□□□ 0.3
SNX3-204ENST00000426155 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
SNX3-204ENST00000426155 FKBP1AP62942 108 aaKnown RBP16.91■□□□□ 0.3
SNX3-204ENST00000426155 POLA2Q14181 598 aa16.91■□□□□ 0.3
SNX3-204ENST00000426155 SULF1Q8IWU6 871 aa16.91■□□□□ 0.3
SNX3-204ENST00000426155 CDCA5Q96FF9 252 aa16.91■□□□□ 0.3
SNX3-204ENST00000426155 ZBED3Q96IU2 234 aaPredicted RBP16.91■□□□□ 0.3
SNX3-204ENST00000426155 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 PHKA1P46020 1223 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 VEGFBP49765 207 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 TIMM10P62072 90 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
SNX3-204ENST00000426155 CFAP100Q494V2 611 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 PRAMEF18Q5VWM3 479 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 TTF2Q9UNY4 1162 aaKnown RBP16.9■□□□□ 0.3
SNX3-204ENST00000426155 TLL2Q9Y6L7 1015 aa16.9■□□□□ 0.3
SNX3-204ENST00000426155 A0A1B0GUL7 405 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 ATP8B2P98198 1209 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 GRM1Q13255 1194 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 DLGAP5Q15398 846 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 DEFB115Q30KQ5 88 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 CEP85Q6P2H3 762 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 PAXIP1Q6ZW49 1069 aaPredicted RBP16.89■□□□□ 0.29
SNX3-204ENST00000426155 SSH3Q8TE77 659 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 PITPNM2Q9BZ72 1349 aa16.89■□□□□ 0.29
SNX3-204ENST00000426155 PAPPA2Q9BXP8 1791 aa16.88■□□□□ 0.29
SNX3-204ENST00000426155 CLRN2A0PK11 232 aa16.88■□□□□ 0.29
SNX3-204ENST00000426155 RBM5P52756 815 aaKnown RBP eCLIP16.88■□□□□ 0.29
SNX3-204ENST00000426155 CYP4F22Q6NT55 531 aa16.88■□□□□ 0.29
SNX3-204ENST00000426155 SAPCD2Q86UD0 394 aa16.88■□□□□ 0.29
SNX3-204ENST00000426155 PRMT6Q96LA8 375 aaPredicted RBP16.88■□□□□ 0.29
SNX3-204ENST00000426155 SPDYE2BA6NHP3 402 aa16.87■□□□□ 0.29
SNX3-204ENST00000426155 SPDYE6P0CI01 402 aa16.87■□□□□ 0.29
SNX3-204ENST00000426155 G3BP1Q13283 466 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX3-204ENST00000426155 CCDC102BQ68D86 513 aa16.87■□□□□ 0.29
SNX3-204ENST00000426155 SURF6O75683 361 aaKnown RBP16.86■□□□□ 0.29
SNX3-204ENST00000426155 MS4A1P11836 297 aa16.86■□□□□ 0.29
SNX3-204ENST00000426155 MTMR14Q8NCE2 650 aa16.86■□□□□ 0.29
SNX3-204ENST00000426155 XAGE2Q96GT9 111 aa16.86■□□□□ 0.29
SNX3-204ENST00000426155 GBA2Q9HCG7 927 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms