RNA–Protein interactions for RNA: ENST00000426150.5

SSBP3-207, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 851 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-207ENST00000426150 LNPKQ9C0E8 428 aa9.15□□□□□ -0.94
SSBP3-207ENST00000426150 RASSF4Q9H2L5 321 aa9.15□□□□□ -0.94
SSBP3-207ENST00000426150 PRR12Q9ULL5 1215 aa9.15□□□□□ -0.94
SSBP3-207ENST00000426150 GPR25O00155 361 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 ATP11AP98196 1134 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 RBL2Q08999 1139 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 FOXR1Q6PIV2 292 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 HFE2Q6ZVN8 426 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 RHOVQ96L33 236 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 IGFLR1Q9H665 355 aa9.14□□□□□ -0.95
SSBP3-207ENST00000426150 DNAJB12Q9NXW2 375 aaKnown RBP9.14□□□□□ -0.95
SSBP3-207ENST00000426150 ENC1O14682 589 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 LIG3P49916 1009 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 PCSK7Q16549 785 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 RPS26P11Q5JNZ5 115 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-207ENST00000426150 SYT9Q86SS6 491 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 ASAP3Q8TDY4 903 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 ZNF296Q8WUU4 475 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-207ENST00000426150 SEC16BQ96JE7 1060 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 SPATA32Q96LK8 384 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 NECAB3Q96P71 396 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-207ENST00000426150 ZNF576Q9H609 170 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 SEC31BQ9NQW1 1179 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 KCNQ5Q9NR82 932 aa9.13□□□□□ -0.95
SSBP3-207ENST00000426150 GMPR2Q9P2T1 348 aaKnown RBP9.13□□□□□ -0.95
SSBP3-207ENST00000426150 CDC14CA4D256 554 aa9.12□□□□□ -0.95
SSBP3-207ENST00000426150 GHRHP01286 108 aa9.12□□□□□ -0.95
SSBP3-207ENST00000426150 FAAP100Q0VG06 881 aa9.12□□□□□ -0.95
SSBP3-207ENST00000426150 ZNF468Q5VIY5 522 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-207ENST00000426150 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-207ENST00000426150 HIRIP3Q9BW71 556 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-207ENST00000426150 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
SSBP3-207ENST00000426150 TLR6Q9Y2C9 796 aa9.12□□□□□ -0.95
SSBP3-207ENST00000426150 SMARCA5O60264 1052 aaPredicted RBP9.11□□□□□ -0.95
SSBP3-207ENST00000426150 PPFIA3O75145 1194 aa9.11□□□□□ -0.95
SSBP3-207ENST00000426150 STK10O94804 968 aaKnown RBP9.11□□□□□ -0.95
SSBP3-207ENST00000426150 SNRPBP14678 240 aaKnown RBP9.11□□□□□ -0.95
SSBP3-207ENST00000426150 EIF2AK2P19525 551 aaKnown RBP9.11□□□□□ -0.95
SSBP3-207ENST00000426150 TBC1D8BQ0IIM8 1120 aa9.11□□□□□ -0.95
SSBP3-207ENST00000426150 FBXL19Q6PCT2 694 aa9.11□□□□□ -0.95
SSBP3-207ENST00000426150 VWA5B2Q8N398 1253 aa9.11□□□□□ -0.95
SSBP3-207ENST00000426150 POP1Q99575 1024 aaKnown RBP9.11□□□□□ -0.95
SSBP3-207ENST00000426150 RBSNQ9H1K0 784 aa9.11□□□□□ -0.95
SSBP3-207ENST00000426150 GAPVD1Q14C86 1478 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 C2CD2LO14523 706 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 SIN3BO75182 1162 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 PF4P02776 101 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 GARTP22102 1010 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 FAM160A1Q05DH4 1040 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 TTBK2Q6IQ55 1244 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 AGMOQ6ZNB7 445 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 PMFBP1Q8TBY8 1022 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 NT5C1AQ9BXI3 368 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 MUC3BQ9H195 1237 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 GPN3Q9UHW5 284 aaPredicted RBP9.1□□□□□ -0.95
SSBP3-207ENST00000426150 SUPT16HQ9Y5B9 1047 aaKnown RBP9.1□□□□□ -0.95
SSBP3-207ENST00000426150 SYNJ1O43426 1573 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 ABCC8Q09428 1581 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 PRDM2Q13029 1718 aa9.1□□□□□ -0.95
SSBP3-207ENST00000426150 GREM1O60565 184 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 PAGE1O75459 146 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 SMNDC1O75940 238 aaKnown RBP eCLIP9.09□□□□□ -0.95
SSBP3-207ENST00000426150 BMP4P12644 408 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 NASPP49321 788 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-207ENST00000426150 LMNB2Q03252 620 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 CAMK2GQ13555 558 aaPredicted RBP9.09□□□□□ -0.95
SSBP3-207ENST00000426150 CCDC144BQ3MJ40 725 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 SOGA3Q5TF21 947 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 GIMAP6Q6P9H5 292 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 SV2AQ7L0J3 742 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 BSNDQ8WZ55 320 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 EFR3BQ9Y2G0 817 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 CLASP1Q7Z460 1538 aa9.09□□□□□ -0.95
SSBP3-207ENST00000426150 TDRD9Q8NDG6 1382 aaKnown RBP9.09□□□□□ -0.95
SSBP3-207ENST00000426150 TFE3P19532 575 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-207ENST00000426150 PCBP4P57723 403 aaKnown RBP9.08□□□□□ -0.96
SSBP3-207ENST00000426150 RPS26P62854 115 aaKnown RBP9.08□□□□□ -0.96
SSBP3-207ENST00000426150 SNAP47Q5SQN1 464 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 PCNX4Q63HM2 1172 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 CEP135Q66GS9 1140 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 Q6ZNB5 142 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 FAM35AQ86V20 835 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 CLEC4MQ9H2X3 399 aaPredicted RBP9.08□□□□□ -0.96
SSBP3-207ENST00000426150 GINM1Q9NU53 330 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 TMEM39AQ9NV64 488 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 SLC6A14Q9UN76 642 aa9.08□□□□□ -0.96
SSBP3-207ENST00000426150 TARBP1Q13395 1621 aaKnown RBP9.07□□□□□ -0.96
SSBP3-207ENST00000426150 CPB1P15086 417 aa9.07□□□□□ -0.96
SSBP3-207ENST00000426150 NOP9Q86U38 636 aaKnown RBP9.07□□□□□ -0.96
SSBP3-207ENST00000426150 GOLM1Q8NBJ4 401 aa9.07□□□□□ -0.96
SSBP3-207ENST00000426150 NANOS1Q8WY41 292 aaKnown RBP9.07□□□□□ -0.96
SSBP3-207ENST00000426150 TNFRSF25Q93038 417 aa9.07□□□□□ -0.96
SSBP3-207ENST00000426150 PLD4Q96BZ4 506 aa9.07□□□□□ -0.96
SSBP3-207ENST00000426150 AVENQ9NQS1 362 aaPredicted RBP9.07□□□□□ -0.96
SSBP3-207ENST00000426150 UBP1Q9NZI7 540 aa9.07□□□□□ -0.96
SSBP3-207ENST00000426150 SNAPC4Q5SXM2 1469 aa9.07□□□□□ -0.96
SSBP3-207ENST00000426150 SSBP05455 408 aaKnown RBP eCLIP9.06□□□□□ -0.96
SSBP3-207ENST00000426150 SOX9P48436 509 aa9.06□□□□□ -0.96
SSBP3-207ENST00000426150 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
SSBP3-207ENST00000426150 NAGPAQ9UK23 515 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms