RNA–Protein interactions for RNA: ENST00000426142.6

CTNND1-207, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-207ENST00000426142 PLCG2P16885 1265 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 NF2P35240 595 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 ARID5AQ03989 594 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 SNW1Q13573 536 aaKnown RBP9.03□□□□□ -0.96
CTNND1-207ENST00000426142 KLHL40Q2TBA0 621 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 DPH6Q7L8W6 267 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 PSMD1Q99460 953 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 SLC52A2Q9HAB3 445 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 GPCPD1Q9NPB8 672 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 ATP7AQ04656 1500 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 TRIM75PA6NK02 468 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 PTGS1P23219 599 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 TEX11Q8IYF3 940 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 GBP3Q9H0R5 595 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 PIK3C2GO75747 1445 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 RTL1A6NKG5 1358 aa9.03□□□□□ -0.96
CTNND1-207ENST00000426142 GOLGA6L7A0A1B0GV03 622 aa9.02□□□□□ -0.96
CTNND1-207ENST00000426142 SPTLC2O15270 562 aa9.02□□□□□ -0.96
CTNND1-207ENST00000426142 SYNCQ9H7C4 482 aa9.02□□□□□ -0.96
CTNND1-207ENST00000426142 ATP10AO60312 1499 aa9.02□□□□□ -0.96
CTNND1-207ENST00000426142 USP19O94966 1318 aa9.02□□□□□ -0.96
CTNND1-207ENST00000426142 B4E1Z4 1266 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 AKR1B10O60218 316 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 TNNI3KQ59H18 835 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 PPP4R3BQ5MIZ7 849 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 HOOK3Q86VS8 718 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 XAGE2Q96GT9 111 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 DBNDD2Q9BQY9 259 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 TCHPQ9BT92 498 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 DENND2AQ9ULE3 1009 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 FPGT-TNNI3KV9GXZ4 949 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 SHANK2Q9UPX8 1470 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 HIBADHP31937 336 aaKnown RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 STX17P56962 302 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 LRSAM1Q6UWE0 723 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 PUS7Q96PZ0 661 aaKnown RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 RNF216Q9NWF9 866 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 MRVI1Q9Y6F6 885 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 COL17A1Q9UMD9 1497 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 PBRM1Q86U86 1689 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 ZBTB7BO15156 539 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 MAP2K1Q02750 393 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 ZYXQ15942 572 aaKnown RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 MAP9Q49MG5 647 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 DHX32Q7L7V1 743 aaKnown RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 SPAG5Q96R06 1193 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 PZPP20742 1482 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 EDC4Q6P2E9 1401 aaKnown RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 DNMT1P26358 1616 aaKnown RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 EYA2O00167 538 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 POLR3GO15318 223 aaPredicted RBP9.02□□□□□ -0.97
CTNND1-207ENST00000426142 BMP15O95972 392 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 GNG11P61952 73 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 TBC1D5Q92609 795 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 STK32BQ9NY57 414 aa9.02□□□□□ -0.97
CTNND1-207ENST00000426142 DTNBO60941 627 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 SEC24BO95487 1268 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 PARP1P09874 1014 aaKnown RBP9.01□□□□□ -0.97
CTNND1-207ENST00000426142 KRT13P13646 458 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 CBX1P83916 185 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 UBE4AQ14139 1066 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 LMOD1P29536 600 aaPredicted RBP9.01□□□□□ -0.97
CTNND1-207ENST00000426142 PUM3Q15397 648 aaKnown RBP9.01□□□□□ -0.97
CTNND1-207ENST00000426142 DNAJC10Q8IXB1 793 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 ZNF408Q9H9D4 720 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 SH3TC1Q8TE82 1336 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 NEMFO60524 1076 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 PDE8AO60658 829 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 PRDM1O75626 825 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 GJC1P36383 396 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 KRT79Q5XKE5 535 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 SUCLG2Q96I99 432 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 AATFQ9NY61 560 aaKnown RBP eCLIP9.01□□□□□ -0.97
CTNND1-207ENST00000426142 PRKG1Q13976 671 aa9.01□□□□□ -0.97
CTNND1-207ENST00000426142 FAM13AO94988 1023 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 TERF1P54274 439 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 ZNF174Q15697 407 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 SPECC1Q5M775 1068 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 CCDC91Q7Z6B0 441 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 GGA1Q9UJY5 639 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 TRAF1Q13077 416 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 BEGAINQ9BUH8 593 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 HELLSQ9NRZ9 838 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 USP21Q9UK80 565 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 TRIM35Q9UPQ4 493 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 TMEM110-MUSTN1A8MSY1 372 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 PSMA7O14818 248 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 PER1O15534 1290 aaPredicted RBP9□□□□□ -0.97
CTNND1-207ENST00000426142 CALML3P27482 149 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 CEP135Q66GS9 1140 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 FAM227BQ96M60 508 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 UIMC1Q96RL1 719 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 ZNF354CQ86Y25 554 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 SLAIN2Q9P270 581 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9□□□□□ -0.974e-9■□□□□ 9.9
CTNND1-207ENST00000426142 COMMD10Q9Y6G5 202 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 CTDSPL2Q05D32 466 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 LETM2Q2VYF4 491 aa9□□□□□ -0.97
CTNND1-207ENST00000426142 USP26Q9BXU7 913 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms