RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 CYP21A2P08686 494 aa12.61□□□□□ -0.39
CUX1-205ENST00000425244 FOSBP53539 338 aa12.61□□□□□ -0.39
CUX1-205ENST00000425244 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
CUX1-205ENST00000425244 CLEC4GQ6UXB4 293 aa12.61□□□□□ -0.39
CUX1-205ENST00000425244 LDHAL6AQ6ZMR3 332 aa12.61□□□□□ -0.39
CUX1-205ENST00000425244 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
CUX1-205ENST00000425244 GOLGA6L4A6NEF3 574 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 CAMK4Q16566 473 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 SEC31BQ9NQW1 1179 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 CNNM1Q9NRU3 951 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 NAP1L2Q9ULW6 460 aaPredicted RBP12.6□□□□□ -0.39
CUX1-205ENST00000425244 ADCY5O95622 1261 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 ATG9AQ7Z3C6 839 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 BRF1Q92994 677 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 ZNF830Q96NB3 372 aaPredicted RBP12.6□□□□□ -0.39
CUX1-205ENST00000425244 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 RREB1Q92766 1687 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 CDHR2Q9BYE9 1310 aa12.6□□□□□ -0.39
CUX1-205ENST00000425244 ANKRD18BA2A2Z9 1011 aa12.59□□□□□ -0.39
CUX1-205ENST00000425244 ZNF500O60304 480 aaPredicted RBP12.59□□□□□ -0.39
CUX1-205ENST00000425244 EN1Q05925 392 aaPredicted RBP12.59□□□□□ -0.39
CUX1-205ENST00000425244 TSGA10IPQ3SY00 556 aa12.59□□□□□ -0.39
CUX1-205ENST00000425244 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.59□□□□□ -0.391e-9■■□□□ 12.2
CUX1-205ENST00000425244 EYA2O00167 538 aa12.59□□□□□ -0.39
CUX1-205ENST00000425244 PPFIA3O75145 1194 aa12.59□□□□□ -0.39
CUX1-205ENST00000425244 CSF1RP07333 972 aa12.59□□□□□ -0.39
CUX1-205ENST00000425244 HELBQ8NG08 1087 aaPredicted RBP12.59□□□□□ -0.39
CUX1-205ENST00000425244 SPATA32Q96LK8 384 aa12.59□□□□□ -0.39
CUX1-205ENST00000425244 H3BQV1 296 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 LIG1P18858 919 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 ZNF827Q17R98 1081 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 UVSSAQ2YD98 709 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 IFFO2Q5TF58 517 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 GTF3C6Q969F1 213 aa12.58□□□□□ -0.39
CUX1-205ENST00000425244 ZNF831Q5JPB2 1677 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 CICQ96RK0 1608 aaPredicted RBP12.58□□□□□ -0.4
CUX1-205ENST00000425244 IL15P40933 162 aaPredicted RBP12.58□□□□□ -0.4
CUX1-205ENST00000425244 STOX1Q6ZVD7 989 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 PLA2G12BQ9BX93 195 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 TPM2P07951 284 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 IFIT1P09914 478 aaKnown RBP12.58□□□□□ -0.4
CUX1-205ENST00000425244 MCM5P33992 734 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 METTL24Q5JXM2 366 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 ALDH8A1Q9H2A2 487 aaPredicted RBP12.58□□□□□ -0.4
CUX1-205ENST00000425244 CEP126Q9P2H0 1117 aa12.58□□□□□ -0.4
CUX1-205ENST00000425244 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 A0A1B0GUL7 405 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 FKBP4Q02790 459 aaKnown RBP eCLIP12.57□□□□□ -0.4
CUX1-205ENST00000425244 EZH2Q15910 746 aaKnown RBP12.57□□□□□ -0.4
CUX1-205ENST00000425244 CKAP2LQ8IYA6 745 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 NUP62CLQ9H1M0 184 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 SNAP23O00161 211 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 CEBPZQ03701 1054 aaKnown RBP12.57□□□□□ -0.4
CUX1-205ENST00000425244 NFIXQ14938 502 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 GORABQ5T7V8 394 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 MPHOSPH8Q99549 860 aa12.57□□□□□ -0.4
CUX1-205ENST00000425244 MYH3P11055 1940 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 PLSCR1O15162 318 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 KDM4AO75164 1064 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 CCDC192P0DO97 292 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 KIAA2012Q0VF49 1180 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 CCDC152Q4G0S7 254 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 TPTE2Q6XPS3 522 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 CHST3Q7LGC8 479 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 BICD2Q8TD16 824 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 FUCA2Q9BTY2 467 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 SCAND2PQ9GZW5 306 aaPredicted RBP12.56□□□□□ -0.4
CUX1-205ENST00000425244 TTC12Q9H892 705 aaPredicted RBP12.56□□□□□ -0.4
CUX1-205ENST00000425244 DACT1Q9NYF0 836 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 CCT2P78371 535 aaKnown RBP12.56□□□□□ -0.4
CUX1-205ENST00000425244 APOBRQ0VD83 1088 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 SCRN1Q12765 414 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 MAP3K11Q16584 847 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 LEO1Q8WVC0 666 aaPredicted RBP12.56□□□□□ -0.4
CUX1-205ENST00000425244 ABCC12Q96J65 1359 aa12.56□□□□□ -0.4
CUX1-205ENST00000425244 BCORQ6W2J9 1755 aa12.55□□□□□ -0.4
CUX1-205ENST00000425244 GYS1P13807 737 aa12.55□□□□□ -0.4
CUX1-205ENST00000425244 DEFB132Q7Z7B7 95 aa12.55□□□□□ -0.4
CUX1-205ENST00000425244 TNMDQ9H2S6 317 aa12.55□□□□□ -0.4
CUX1-205ENST00000425244 MSL1Q68DK7 614 aa12.55□□□□□ -0.4
CUX1-205ENST00000425244 DHX32Q7L7V1 743 aaKnown RBP12.55□□□□□ -0.4
CUX1-205ENST00000425244 HELLSQ9NRZ9 838 aa12.55□□□□□ -0.4
CUX1-205ENST00000425244 C4AP0C0L4 1744 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 HSPD1P10809 573 aaKnown RBP12.54□□□□□ -0.4
CUX1-205ENST00000425244 DNTTIP2Q5QJE6 756 aaKnown RBP12.54□□□□□ -0.4
CUX1-205ENST00000425244 C17orf53Q8N3J3 647 aaPredicted RBP12.54□□□□□ -0.4
CUX1-205ENST00000425244 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 NCOA5Q9HCD5 579 aaKnown RBP12.54□□□□□ -0.4
CUX1-205ENST00000425244 ELP1O95163 1332 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 TAF1P21675 1872 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 RNF113AO15541 343 aaKnown RBP12.54□□□□□ -0.4
CUX1-205ENST00000425244 ADORA1P30542 326 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 ZMYM1Q5SVZ6 1142 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
CUX1-205ENST00000425244 SPC24Q8NBT2 197 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms