RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 KLHL34Q8N239 644 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 TDRD7Q8NHU6 1098 aaKnown RBP12.48□□□□□ -0.41
MDC1-205ENST00000425072 WDR66Q8TBY9 1149 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 RTFDC1Q9BY42 306 aaPredicted RBP12.48□□□□□ -0.41
MDC1-205ENST00000425072 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
MDC1-205ENST00000425072 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
MDC1-205ENST00000425072 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
MDC1-205ENST00000425072 WTIPA6NIX2 430 aaPredicted RBP12.47□□□□□ -0.41
MDC1-205ENST00000425072 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
MDC1-205ENST00000425072 SLC34A2O95436 690 aa12.47□□□□□ -0.41
MDC1-205ENST00000425072 CYP2E1P05181 493 aaPredicted RBP12.47□□□□□ -0.41
MDC1-205ENST00000425072 IL1R1P14778 569 aa12.47□□□□□ -0.41
MDC1-205ENST00000425072 MFAP1P55081 439 aaKnown RBP12.47□□□□□ -0.41
MDC1-205ENST00000425072 PODNQ7Z5L7 613 aa12.47□□□□□ -0.41
MDC1-205ENST00000425072 CD209Q9NNX6 404 aa12.47□□□□□ -0.41
MDC1-205ENST00000425072 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
MDC1-205ENST00000425072 RIMBP2O15034 1052 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 RNF113AO15541 343 aaKnown RBP12.46□□□□□ -0.41
MDC1-205ENST00000425072 RASGRF1Q13972 1273 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 SCARF1Q14162 830 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 TXNRD3Q86VQ6 643 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 TBC1D22AQ8WUA7 517 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 PSMD1Q99460 953 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 LRP2BPQ9P2M1 347 aa12.46□□□□□ -0.41
MDC1-205ENST00000425072 RFX7Q2KHR2 1363 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 AKAP11Q9UKA4 1901 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 IRS2Q9Y4H2 1338 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 MCMDC2Q4G0Z9 681 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
MDC1-205ENST00000425072 ESYT1Q9BSJ8 1104 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 ANTXR1Q9H6X2 564 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 COL4A1P02462 1669 aa12.45□□□□□ -0.42
MDC1-205ENST00000425072 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
MDC1-205ENST00000425072 UBE3CQ15386 1083 aa12.44□□□□□ -0.42
MDC1-205ENST00000425072 SLC9C2Q5TAH2 1124 aa12.44□□□□□ -0.42
MDC1-205ENST00000425072 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
MDC1-205ENST00000425072 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
MDC1-205ENST00000425072 ABCF2Q9UG63 623 aa12.44□□□□□ -0.42
MDC1-205ENST00000425072 IQSEC3Q9UPP2 1182 aaPredicted RBP12.44□□□□□ -0.42
MDC1-205ENST00000425072 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
MDC1-205ENST00000425072 ARAP2Q8WZ64 1704 aa12.44□□□□□ -0.42
MDC1-205ENST00000425072 A0A1B0GUL6 1792 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 RAD50Q92878 1312 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 SGSM2O43147 1006 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 SEC24BO95487 1268 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 LDHCP07864 332 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 KLRK1P26718 216 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 KIAA2012Q0VF49 1180 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 TTLL5Q6EMB2 1281 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 OLFM4Q6UX06 510 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 RAI14Q9P0K7 980 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 BCS1LQ9Y276 419 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 SUGT1Q9Y2Z0 365 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 DLEC1Q9Y238 1755 aa12.43□□□□□ -0.42
MDC1-205ENST00000425072 LRRC37AA6NMS7 1700 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
MDC1-205ENST00000425072 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 FAM205AQ6ZU69 1335 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 SALL1Q9NSC2 1324 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 MCCP23508 829 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 GSTO1P78417 241 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 CHAF1AQ13111 956 aaPredicted RBP12.42□□□□□ -0.42
MDC1-205ENST00000425072 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
MDC1-205ENST00000425072 ZMYM1Q5SVZ6 1142 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 PI16Q6UXB8 463 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 APPBP2Q92624 585 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 USP26Q9BXU7 913 aa12.42□□□□□ -0.42
MDC1-205ENST00000425072 PIH1D3Q9NQM4 214 aaKnown RBP12.42□□□□□ -0.42
MDC1-205ENST00000425072 PPIP5K2O43314 1243 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 LDHBP07195 334 aaKnown RBP12.41□□□□□ -0.42
MDC1-205ENST00000425072 ADD2P35612 726 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 FKBP1AP62942 108 aaKnown RBP12.41□□□□□ -0.42
MDC1-205ENST00000425072 DOK7Q18PE1 504 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 IL27Q8NEV9 243 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 GPR101Q96P66 508 aaPredicted RBP12.41□□□□□ -0.42
MDC1-205ENST00000425072 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 C22orf23Q9BZE7 217 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
MDC1-205ENST00000425072 ANO2Q9NQ90 1003 aa12.41□□□□□ -0.42
MDC1-205ENST00000425072 PDE6AP16499 860 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 GTF2IP78347 998 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 NAA16Q6N069 864 aaPredicted RBP12.4□□□□□ -0.42
MDC1-205ENST00000425072 LARGE2Q8N3Y3 721 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 JDP2Q8WYK2 163 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 FAM227BQ96M60 508 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 TAOK3Q9H2K8 898 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 TSHZ2Q9NRE2 1034 aa12.4□□□□□ -0.42
MDC1-205ENST00000425072 ZNF532Q9HCE3 1301 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 USP17L3A6NCW0 530 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 USP17L4A6NCW7 530 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 GNAT2P19087 354 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 IARSP41252 1262 aaKnown RBP12.39□□□□□ -0.43
MDC1-205ENST00000425072 USP17L1Q7RTZ2 530 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 CERS3Q8IU89 383 aa12.39□□□□□ -0.43
MDC1-205ENST00000425072 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
MDC1-205ENST00000425072 MRIQ9BWK5 157 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms