RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ATP2B1P20020 1258 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 GPTP24298 496 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 USP14P54578 494 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 GTF2IP78347 998 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 MAP2K5Q13163 448 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 E2F5Q15329 346 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 TAF1BQ53T94 588 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 CC2D1BQ5T0F9 858 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 NFXL1Q6ZNB6 911 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 CCDC83Q8IWF9 413 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 CCDC26Q8TAB7 109 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 GDPD2Q9HCC8 539 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 TMEM39AQ9NV64 488 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 NIPBLQ6KC79 2804 aaeCLIP4.19□□□□□ -1.743e-9■■■□□ 16.8
TOP2A-201ENST00000423485 FAM135BQ49AJ0 1406 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 SIPA1L3O60292 1781 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 MDM2Q00987 491 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 CES5AQ6NT32 575 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ZNF444Q8N0Y2 327 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 SHCBP1Q8NEM2 672 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 HMX1Q9NP08 348 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 RGS12O14924 1447 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ZNF536O15090 1300 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 IARSP41252 1262 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 HSP90AB4PQ58FF6 505 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 L1TD1Q5T7N2 865 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 LMBRD2Q68DH5 695 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ABCF2Q9UG63 623 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 SALL2Q9Y467 1007 aaPredicted RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 RBM19Q9Y4C8 960 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ALS2Q96Q42 1657 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ATP7AQ04656 1500 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 GCP02774 474 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ALADP13716 330 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 PDE4BQ07343 736 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 IFIT5Q13325 482 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 PTPAQ15257 358 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 METTL24Q5JXM2 366 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 NCAPG2Q86XI2 1143 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 MICALL2Q8IY33 904 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 EIF2AK4Q9P2K8 1649 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 CHD4Q14839 1912 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 CLTCQ00610 1675 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 PABPN1LA6NDY0 278 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 M0R2C6 588 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 MAP3K7O43318 606 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 GNRH1P01148 92 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 XBP1P17861 261 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 NUCB2P80303 420 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 SP3Q02447 781 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 PTH1RQ03431 593 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 ODF2Q5BJF6 829 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 PGBD3Q8N328 593 aa4.19□□□□□ -1.74
TOP2A-201ENST00000423485 DDX17Q92841 729 aaKnown RBP4.19□□□□□ -1.74
TOP2A-201ENST00000423485 PLCH2O75038 1416 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 GNAT1P11488 350 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 KIF4BQ2VIQ3 1234 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 ZNF569Q5MCW4 686 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 IRAK1BP1Q5VVH5 260 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 CCDC30Q5VVM6 783 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 LRRCC1Q9C099 1032 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 ZW10O43264 779 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 IFIT2P09913 472 aaKnown RBP4.18□□□□□ -1.74
TOP2A-201ENST00000423485 WAPLQ7Z5K2 1190 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 MOCOSQ96EN8 888 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 RTN4Q9NQC3 1192 aaKnown RBP4.18□□□□□ -1.74
TOP2A-201ENST00000423485 AKAP2Q9Y2D5 859 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 MSCO60682 206 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 COPB2P35606 906 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 APBA1Q02410 837 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 TMEM31Q5JXX7 168 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 NOC3LQ8WTT2 800 aaKnown RBP4.18□□□□□ -1.74
TOP2A-201ENST00000423485 NECTIN2Q92692 538 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 CARD10Q9BWT7 1032 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 NACA2Q9H009 215 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 MROH7-TTC4A0A0A0MT08 1334 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 MROH7Q68CQ1 1323 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 ALKQ9UM73 1620 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 DPEP1P16444 411 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 TRIM29Q14134 588 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 HSP90AA2PQ14568 343 aaPredicted RBP4.18□□□□□ -1.74
TOP2A-201ENST00000423485 LMBR1LQ6UX01 489 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 CEP126Q9P2H0 1117 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 TSKSQ9UJT2 592 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 KIF3AQ9Y496 699 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 CASZ1Q86V15 1759 aa4.18□□□□□ -1.74
TOP2A-201ENST00000423485 CAPN8A6NHC0 703 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 RARBP10826 455 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ATP2B4P23634 1241 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 PKN1Q16512 942 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SDE2Q6IQ49 451 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 RGS22Q8NE09 1264 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 NUP133Q8WUM0 1156 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ACSF2Q96CM8 615 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SLC4A9Q96Q91 983 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 NUDT12Q9BQG2 462 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SYNDIG1Q9H7V2 258 aa4.17□□□□□ -1.74
TOP2A-201ENST00000423485 ZHX1Q9UKY1 873 aaPredicted RBP4.17□□□□□ -1.74
TOP2A-201ENST00000423485 SMCHD1A6NHR9 2005 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms