RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 FAM84BQ96KN1 310 aaPredicted RBP11.97□□□□□ -0.49
HERC3-204ENST00000422770 NEUROD6Q96NK8 337 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 ZNF408Q9H9D4 720 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 FBXO3Q9UK99 471 aa11.97□□□□□ -0.49
HERC3-204ENST00000422770 SURF6O75683 361 aaKnown RBP11.96□□□□□ -0.49
HERC3-204ENST00000422770 EGFRP00533 1210 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 IL1R1P14778 569 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 HIRAP54198 1017 aaPredicted RBP11.96□□□□□ -0.49
HERC3-204ENST00000422770 MFSD14BQ5SR56 506 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 GORABQ5T7V8 394 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 DCPSQ96C86 337 aaKnown RBP11.96□□□□□ -0.49
HERC3-204ENST00000422770 CRBNQ96SW2 442 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 GLIS2Q9BZE0 524 aaPredicted RBP11.96□□□□□ -0.49
HERC3-204ENST00000422770 CHMP4BQ9H444 224 aaKnown RBP11.96□□□□□ -0.49
HERC3-204ENST00000422770 MYOZ2Q9NPC6 264 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 GGA3Q9NZ52 723 aa11.96□□□□□ -0.49
HERC3-204ENST00000422770 TRAF5O00463 557 aa11.95□□□□□ -0.5
HERC3-204ENST00000422770 SASH1O94885 1247 aa11.95□□□□□ -0.5
HERC3-204ENST00000422770 ATP8B2P98198 1209 aa11.95□□□□□ -0.5
HERC3-204ENST00000422770 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
HERC3-204ENST00000422770 TDRD7Q8NHU6 1098 aaKnown RBP11.95□□□□□ -0.5
HERC3-204ENST00000422770 GNL3LQ9NVN8 582 aaKnown RBP11.95□□□□□ -0.5
HERC3-204ENST00000422770 AKAP2Q9Y2D5 859 aa11.95□□□□□ -0.5
HERC3-204ENST00000422770 ZNF609O15014 1411 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 ASTN2O75129 1339 aaPredicted RBP11.94□□□□□ -0.5
HERC3-204ENST00000422770 APBB1O00213 710 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 FGFR2P21802 821 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 FMR1Q06787 632 aaKnown RBP eCLIP11.94□□□□□ -0.5
HERC3-204ENST00000422770 SCARF1Q14162 830 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 PDE3AQ14432 1141 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 ANGEL2Q5VTE6 544 aaKnown RBP11.94□□□□□ -0.5
HERC3-204ENST00000422770 PAXIP1Q6ZW49 1069 aaPredicted RBP11.94□□□□□ -0.5
HERC3-204ENST00000422770 KRT26Q7Z3Y9 468 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 FBXO33Q7Z6M2 555 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 USP48Q86UV5 1035 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 SULF1Q8IWU6 871 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 CERS5Q8N5B7 392 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 GMLQ99445 158 aa11.94□□□□□ -0.5
HERC3-204ENST00000422770 ABT1Q9ULW3 272 aaKnown RBP11.94□□□□□ -0.5
HERC3-204ENST00000422770 A0A1B0GUL7 405 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 ADM5C9JUS6 153 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 HMMRO75330 724 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 ITGBL1O95965 494 aaPredicted RBP11.93□□□□□ -0.5
HERC3-204ENST00000422770 ADORA1P30542 326 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 ZNF280AP59817 542 aaPredicted RBP11.93□□□□□ -0.5
HERC3-204ENST00000422770 TIMM10P62072 90 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 POLA2Q14181 598 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 DLGAP5Q15398 846 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 CEP85Q6P2H3 762 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 CDC37L1Q7L3B6 337 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 SSH3Q8TE77 659 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
HERC3-204ENST00000422770 TTF2Q9UNY4 1162 aaKnown RBP11.93□□□□□ -0.5
HERC3-204ENST00000422770 SCAF8Q9UPN6 1271 aaKnown RBP11.93□□□□□ -0.5
HERC3-204ENST00000422770 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
HERC3-204ENST00000422770 FAM205AQ6ZU69 1335 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 PASKQ96RG2 1323 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 TMEM88BA6NKF7 163 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 CELF2O95319 508 aaKnown RBP11.92□□□□□ -0.5
HERC3-204ENST00000422770 PHKA1P46020 1223 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 GRM1Q13255 1194 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 NBPF9Q3BBW0 867 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 EXOC6Q8TAG9 804 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 XAGE2Q96GT9 111 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 EXOC6BQ9Y2D4 811 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 MYH2Q9UKX2 1941 aa11.92□□□□□ -0.5
HERC3-204ENST00000422770 MYO1BO43795 1136 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 CFAP100Q494V2 611 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 DLK2Q6UY11 383 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 TBC1D22AQ8WUA7 517 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 CREBZFQ9NS37 354 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 ZBTB40Q9NUA8 1239 aa11.91□□□□□ -0.5
HERC3-204ENST00000422770 MKRN1Q9UHC7 482 aaKnown RBP11.91□□□□□ -0.5
HERC3-204ENST00000422770 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.91□□□□□ -0.5
HERC3-204ENST00000422770 COL1A1P02452 1464 aaPredicted RBP11.9□□□□□ -0.5
HERC3-204ENST00000422770 CLRN2A0PK11 232 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 WNT10BO00744 389 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 FKBP1AP62942 108 aaKnown RBP11.9□□□□□ -0.5
HERC3-204ENST00000422770 TTC39AQ5SRH9 613 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 DNAJC5GQ8N7S2 189 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 VEZTQ9HBM0 779 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 DENND2AQ9ULE3 1009 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 PCDHAC2Q9Y5I4 1007 aa11.9□□□□□ -0.5
HERC3-204ENST00000422770 TTLL12Q14166 644 aaPredicted RBP11.89□□□□□ -0.51
HERC3-204ENST00000422770 HSP90AB4PQ58FF6 505 aa11.89□□□□□ -0.51
HERC3-204ENST00000422770 TNNI3KQ59H18 835 aa11.89□□□□□ -0.51
HERC3-204ENST00000422770 ERC1Q8IUD2 1116 aa11.89□□□□□ -0.51
HERC3-204ENST00000422770 RPAP2Q8IXW5 612 aaPredicted RBP11.89□□□□□ -0.51
HERC3-204ENST00000422770 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
HERC3-204ENST00000422770 ABCF2Q9UG63 623 aa11.89□□□□□ -0.51
HERC3-204ENST00000422770 PGAP2Q9UHJ9 254 aa11.89□□□□□ -0.51
HERC3-204ENST00000422770 FPGT-TNNI3KV9GXZ4 949 aa11.89□□□□□ -0.51
HERC3-204ENST00000422770 MYO5AQ9Y4I1 1855 aaKnown RBP11.89□□□□□ -0.51
HERC3-204ENST00000422770 MAST3O60307 1309 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 LDHBP07195 334 aaKnown RBP11.88□□□□□ -0.51
HERC3-204ENST00000422770 CRKP46108 304 aa11.88□□□□□ -0.51
HERC3-204ENST00000422770 MMP14P50281 582 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms