RNA–Protein interactions for RNA: ENST00000422121.2

NF1-203, Transcript of neurofibromin 1, humanhuman

TSL 3

Gene NF1, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-203ENST00000422121 MTX1Q13505 466 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 UBE4AQ14139 1066 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 TBC1D10BQ4KMP7 808 aaPredicted RBP12.4□□□□□ -0.42
NF1-203ENST00000422121 STRIP1Q5VSL9 837 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 CERS5Q8N5B7 392 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 AGBL3Q8NEM8 1001 aa12.4□□□□□ -0.42
NF1-203ENST00000422121 PA2G4Q9UQ80 394 aaKnown RBP12.4□□□□□ -0.42
NF1-203ENST00000422121 ASTN2O75129 1339 aaPredicted RBP12.39□□□□□ -0.43
NF1-203ENST00000422121 MROH5Q6ZUA9 1318 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 G3V3G9 751 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 H7C1D1 291 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 TRAF5O00463 557 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 ZBTB7BO15156 539 aaPredicted RBP12.39□□□□□ -0.43
NF1-203ENST00000422121 GYG1P46976 350 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 TTLL5Q6EMB2 1281 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 FBXO33Q7Z6M2 555 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 PANK1Q8TE04 598 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 RNF25Q96BH1 459 aaPredicted RBP12.39□□□□□ -0.43
NF1-203ENST00000422121 COPRSQ9NQ92 184 aa12.39□□□□□ -0.43
NF1-203ENST00000422121 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.39□□□□□ -0.43
NF1-203ENST00000422121 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
NF1-203ENST00000422121 GNAI3P08754 354 aa12.38□□□□□ -0.43
NF1-203ENST00000422121 KCNJ4P48050 445 aa12.38□□□□□ -0.43
NF1-203ENST00000422121 GTF2IP78347 998 aa12.38□□□□□ -0.43
NF1-203ENST00000422121 METTL24Q5JXM2 366 aa12.38□□□□□ -0.43
NF1-203ENST00000422121 CST9Q5W186 159 aa12.38□□□□□ -0.43
NF1-203ENST00000422121 DZIP1LQ8IYY4 767 aaKnown RBP12.38□□□□□ -0.43
NF1-203ENST00000422121 TDRD7Q8NHU6 1098 aaKnown RBP12.38□□□□□ -0.43
NF1-203ENST00000422121 GLIS2Q9BZE0 524 aaPredicted RBP12.38□□□□□ -0.43
NF1-203ENST00000422121 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.38□□□□□ -0.43
NF1-203ENST00000422121 CIAO1O76071 339 aa12.37□□□□□ -0.43
NF1-203ENST00000422121 USP17L8P0C7I0 530 aa12.37□□□□□ -0.43
NF1-203ENST00000422121 RBM26Q5T8P6 1007 aaKnown RBP12.37□□□□□ -0.43
NF1-203ENST00000422121 ZC3H15Q8WU90 426 aaKnown RBP12.37□□□□□ -0.43
NF1-203ENST00000422121 SIL1Q9H173 461 aa12.37□□□□□ -0.43
NF1-203ENST00000422121 JAG2Q9Y219 1238 aa12.37□□□□□ -0.43
NF1-203ENST00000422121 SRGAP3O43295 1099 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 SASH1O94885 1247 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 GNAI2P04899 355 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 HIBADHP31937 336 aaKnown RBP12.36□□□□□ -0.43
NF1-203ENST00000422121 BCAMP50895 628 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 GRIK5Q16478 980 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 ZBED3Q96IU2 234 aaPredicted RBP12.36□□□□□ -0.43
NF1-203ENST00000422121 C1orf115Q9H7X2 142 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 MYOZ2Q9NPC6 264 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 RCAN3Q9UKA8 241 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 PCDHAC2Q9Y5I4 1007 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 FAM205AQ6ZU69 1335 aa12.36□□□□□ -0.43
NF1-203ENST00000422121 CHRM1P11229 460 aaPredicted RBP12.35□□□□□ -0.43
NF1-203ENST00000422121 SCARF1Q14162 830 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 KIF4BQ2VIQ3 1234 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 NBPF9Q3BBW0 867 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 ZNF804AQ7Z570 1209 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 USP48Q86UV5 1035 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 KIAA0825Q8IV33 1275 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 KLRG1Q96E93 195 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 AOX1Q06278 1338 aa12.35□□□□□ -0.43
NF1-203ENST00000422121 POLR2AP24928 1970 aaKnown RBP12.34□□□□□ -0.43
NF1-203ENST00000422121 IL15P40933 162 aaPredicted RBP12.34□□□□□ -0.43
NF1-203ENST00000422121 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
NF1-203ENST00000422121 PUM3Q15397 648 aaKnown RBP12.34□□□□□ -0.43
NF1-203ENST00000422121 C20orf194Q5TEA3 1177 aa12.34□□□□□ -0.43
NF1-203ENST00000422121 FBXW7Q969H0 707 aa12.34□□□□□ -0.43
NF1-203ENST00000422121 SCAF8Q9UPN6 1271 aaKnown RBP12.34□□□□□ -0.43
NF1-203ENST00000422121 IQSEC3Q9UPP2 1182 aaPredicted RBP12.34□□□□□ -0.43
NF1-203ENST00000422121 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
NF1-203ENST00000422121 TMEM88BA6NKF7 163 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 ADM5C9JUS6 153 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 WNT10BO00744 389 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 ADORA1P30542 326 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 FKBP1AP62942 108 aaKnown RBP12.33□□□□□ -0.44
NF1-203ENST00000422121 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 ITPRIPQ8IWB1 547 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 FTSJ3Q8IY81 847 aaKnown RBP12.33□□□□□ -0.44
NF1-203ENST00000422121 JMYQ8N9B5 988 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 SSH3Q8TE77 659 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 LPIN2Q92539 896 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 MYO3BQ8WXR4 1341 aa12.33□□□□□ -0.44
NF1-203ENST00000422121 TIMM10P62072 90 aa12.32□□□□□ -0.44
NF1-203ENST00000422121 TFCP2Q12800 502 aa12.32□□□□□ -0.44
NF1-203ENST00000422121 ANGEL2Q5VTE6 544 aaKnown RBP12.32□□□□□ -0.44
NF1-203ENST00000422121 CEP126Q9P2H0 1117 aa12.32□□□□□ -0.44
NF1-203ENST00000422121 F8W031 263 aaPredicted RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 MVPQ14764 893 aaKnown RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 PAXIP1Q6ZW49 1069 aaPredicted RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 KRT26Q7Z3Y9 468 aa12.31□□□□□ -0.44
NF1-203ENST00000422121 PRMT6Q96LA8 375 aaPredicted RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
NF1-203ENST00000422121 GGA3Q9NZ52 723 aa12.31□□□□□ -0.44
NF1-203ENST00000422121 MKRN1Q9UHC7 482 aaKnown RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 COG6Q9Y2V7 657 aa12.31□□□□□ -0.44
NF1-203ENST00000422121 COL1A1P02452 1464 aaPredicted RBP12.31□□□□□ -0.44
NF1-203ENST00000422121 CNTNAP1P78357 1384 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 RASSF10A6NK89 507 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 RIOK3O14730 519 aaKnown RBP12.3□□□□□ -0.44
NF1-203ENST00000422121 CELF2O95319 508 aaKnown RBP12.3□□□□□ -0.44
NF1-203ENST00000422121 PHKA1P46020 1223 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 VEGFBP49765 207 aa12.3□□□□□ -0.44
NF1-203ENST00000422121 ATP2B3Q16720 1220 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms