RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 F8W031 263 aaPredicted RBP19.4■□□□□ 0.7
BRAT1-202ENST00000421712 PHKA1P46020 1223 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 IRX6P78412 446 aaPredicted RBP19.4■□□□□ 0.7
BRAT1-202ENST00000421712 TBC1D10BQ4KMP7 808 aaPredicted RBP19.4■□□□□ 0.7
BRAT1-202ENST00000421712 TNNI3KQ59H18 835 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 SAMD7Q7Z3H4 446 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 LDHDQ86WU2 507 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 KIAA0825Q8IV33 1275 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 SMC1BQ8NDV3 1235 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 RBM46Q8TBY0 533 aaKnown RBP19.4■□□□□ 0.7
BRAT1-202ENST00000421712 HDAC9Q9UKV0 1011 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 FPGT-TNNI3KV9GXZ4 949 aa19.4■□□□□ 0.7
BRAT1-202ENST00000421712 POTEIP0CG38 1075 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 POTEJP0CG39 1038 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 C1QTNF8P60827 252 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 MFSD14BQ5SR56 506 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 CCDC102BQ68D86 513 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 EXOC6Q8TAG9 804 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 GMLQ99445 158 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 GPR108Q9NPR9 543 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 PCDHB15Q9Y5E8 787 aa19.39■□□□□ 0.69
BRAT1-202ENST00000421712 RAB11FIP3O75154 756 aa19.38■□□□□ 0.69
BRAT1-202ENST00000421712 PSME4Q14997 1843 aa19.38■□□□□ 0.69
BRAT1-202ENST00000421712 FAM205AQ6ZU69 1335 aa19.38■□□□□ 0.69
BRAT1-202ENST00000421712 RHPN1Q8TCX5 695 aa19.38■□□□□ 0.69
BRAT1-202ENST00000421712 KIF1BPQ96EK5 621 aa19.38■□□□□ 0.69
BRAT1-202ENST00000421712 IL1RAPL2Q9NP60 686 aa19.38■□□□□ 0.69
BRAT1-202ENST00000421712 FKBP1AP62942 108 aaKnown RBP19.37■□□□□ 0.69
BRAT1-202ENST00000421712 KIF4BQ2VIQ3 1234 aa19.37■□□□□ 0.69
BRAT1-202ENST00000421712 CHADLQ6NUI6 762 aa19.37■□□□□ 0.69
BRAT1-202ENST00000421712 TRPM4Q8TD43 1214 aa19.37■□□□□ 0.69
BRAT1-202ENST00000421712 TBC1D22AQ8WUA7 517 aa19.37■□□□□ 0.69
BRAT1-202ENST00000421712 CCDC8Q9H0W5 538 aaPredicted RBP19.37■□□□□ 0.69
BRAT1-202ENST00000421712 DENND2AQ9ULE3 1009 aa19.37■□□□□ 0.69
BRAT1-202ENST00000421712 ZNF609O15014 1411 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 FSTL1Q12841 308 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 AAMPQ13685 434 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 CCDC158Q5M9N0 1113 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 TTC39AQ5SRH9 613 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 AACSQ86V21 672 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 CLASRPQ8N2M8 674 aaKnown RBP19.36■□□□□ 0.69
BRAT1-202ENST00000421712 CERS5Q8N5B7 392 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 MYOZ2Q9NPC6 264 aa19.36■□□□□ 0.69
BRAT1-202ENST00000421712 ZNF280AP59817 542 aaPredicted RBP19.35■□□□□ 0.69
BRAT1-202ENST00000421712 MAP1SQ66K74 1059 aaPredicted RBP19.35■□□□□ 0.69
BRAT1-202ENST00000421712 WDR66Q8TBY9 1149 aa19.35■□□□□ 0.69
BRAT1-202ENST00000421712 EAF2Q96CJ1 260 aaPredicted RBP19.35■□□□□ 0.69
BRAT1-202ENST00000421712 DBNDD2Q9BQY9 259 aa19.35■□□□□ 0.69
BRAT1-202ENST00000421712 SEMA3EO15041 775 aa19.34■□□□□ 0.69
BRAT1-202ENST00000421712 EGFRP00533 1210 aa19.34■□□□□ 0.69
BRAT1-202ENST00000421712 RBM5P52756 815 aaKnown RBP eCLIP19.34■□□□□ 0.69
BRAT1-202ENST00000421712 HIRAP54198 1017 aaPredicted RBP19.34■□□□□ 0.69
BRAT1-202ENST00000421712 TTF2Q9UNY4 1162 aaKnown RBP19.34■□□□□ 0.69
BRAT1-202ENST00000421712 IFIT2P09913 472 aaKnown RBP19.33■□□□□ 0.68
BRAT1-202ENST00000421712 UQCRFS1P1P0C7P4 283 aa19.33■□□□□ 0.68
BRAT1-202ENST00000421712 MMP14P50281 582 aa19.33■□□□□ 0.68
BRAT1-202ENST00000421712 CNTROBQ8N137 903 aa19.33■□□□□ 0.68
BRAT1-202ENST00000421712 LRRCC1Q9C099 1032 aa19.33■□□□□ 0.68
BRAT1-202ENST00000421712 DCTPP1Q9H773 170 aa19.33■□□□□ 0.68
BRAT1-202ENST00000421712 RASGRF1Q13972 1273 aa19.32■□□□□ 0.68
BRAT1-202ENST00000421712 SCARF1Q14162 830 aa19.32■□□□□ 0.68
BRAT1-202ENST00000421712 DLGAP5Q15398 846 aa19.32■□□□□ 0.68
BRAT1-202ENST00000421712 DBNLQ9UJU6 430 aaKnown RBP19.32■□□□□ 0.68
BRAT1-202ENST00000421712 MYH13Q9UKX3 1938 aa19.31■□□□□ 0.68
BRAT1-202ENST00000421712 SMARCA5O60264 1052 aaPredicted RBP19.31■□□□□ 0.68
BRAT1-202ENST00000421712 ZC3H15Q8WU90 426 aaKnown RBP19.31■□□□□ 0.68
BRAT1-202ENST00000421712 DCPSQ96C86 337 aaKnown RBP19.31■□□□□ 0.68
BRAT1-202ENST00000421712 TLR7Q9NYK1 1049 aaKnown RBP19.31■□□□□ 0.68
BRAT1-202ENST00000421712 ZBTB47Q9UFB7 747 aaPredicted RBP19.31■□□□□ 0.68
BRAT1-202ENST00000421712 ARAP2Q8WZ64 1704 aa19.31■□□□□ 0.68
BRAT1-202ENST00000421712 ARID4AP29374 1257 aaPredicted RBP19.3■□□□□ 0.68
BRAT1-202ENST00000421712 GRIK5Q16478 980 aa19.3■□□□□ 0.68
BRAT1-202ENST00000421712 CFAP100Q494V2 611 aa19.3■□□□□ 0.68
BRAT1-202ENST00000421712 ZGPATQ8N5A5 531 aaKnown RBP19.3■□□□□ 0.68
BRAT1-202ENST00000421712 SPATA5Q8NB90 893 aa19.3■□□□□ 0.68
BRAT1-202ENST00000421712 RWDD1Q9H446 243 aaPredicted RBP19.3■□□□□ 0.68
BRAT1-202ENST00000421712 ABCF2Q9UG63 623 aa19.3■□□□□ 0.68
BRAT1-202ENST00000421712 SUGT1Q9Y2Z0 365 aa19.3■□□□□ 0.68
BRAT1-202ENST00000421712 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
BRAT1-202ENST00000421712 CENPBP07199 599 aaPredicted RBP19.29■□□□□ 0.68
BRAT1-202ENST00000421712 NBPF9Q3BBW0 867 aa19.29■□□□□ 0.68
BRAT1-202ENST00000421712 SNRKQ9NRH2 765 aa19.29■□□□□ 0.68
BRAT1-202ENST00000421712 HMG20BQ9P0W2 317 aa19.29■□□□□ 0.68
BRAT1-202ENST00000421712 ZNF646O15015 1829 aaPredicted RBP19.29■□□□□ 0.68
BRAT1-202ENST00000421712 WNT10BO00744 389 aa19.28■□□□□ 0.68
BRAT1-202ENST00000421712 MCAMP43121 646 aa19.28■□□□□ 0.68
BRAT1-202ENST00000421712 HDAC1Q13547 482 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-202ENST00000421712 ANGEL2Q5VTE6 544 aaKnown RBP19.28■□□□□ 0.68
BRAT1-202ENST00000421712 SPTY2D1Q68D10 685 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-202ENST00000421712 PI16Q6UXB8 463 aa19.28■□□□□ 0.68
BRAT1-202ENST00000421712 GGA3Q9NZ52 723 aa19.28■□□□□ 0.68
BRAT1-202ENST00000421712 PGAP2Q9UHJ9 254 aa19.28■□□□□ 0.68
BRAT1-202ENST00000421712 COL1A1P02452 1464 aaPredicted RBP19.28■□□□□ 0.68
BRAT1-202ENST00000421712 MAST3O60307 1309 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 ASTN2O75129 1339 aaPredicted RBP19.27■□□□□ 0.68
BRAT1-202ENST00000421712 MYO1BO43795 1136 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 CRKP46108 304 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 CDC37L1Q7L3B6 337 aa19.27■□□□□ 0.68
BRAT1-202ENST00000421712 USP48Q86UV5 1035 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms