RNA–Protein interactions for RNA: ENST00000421538.1

LINC00899-201, long intergenic non-protein coding RNA 899, humanhuman

TSL 1 (best)

Gene LINC00899, Length 2,584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00899-201ENST00000421538 CCDC69A6NI79 296 aa16.29■□□□□ 0.2
LINC00899-201ENST00000421538 H7C1W4 665 aa16.29■□□□□ 0.2
LINC00899-201ENST00000421538 TSPYL1Q9H0U9 437 aa16.29■□□□□ 0.2
LINC00899-201ENST00000421538 RABL6Q3YEC7 729 aaPredicted RBP16.29■□□□□ 0.2
LINC00899-201ENST00000421538 ZNF589Q86UQ0 364 aaPredicted RBP16.29■□□□□ 0.2
LINC00899-201ENST00000421538 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
LINC00899-201ENST00000421538 CERKQ8TCT0 537 aa16.29■□□□□ 0.2
LINC00899-201ENST00000421538 EDC3Q96F86 508 aaKnown RBP16.29■□□□□ 0.2
LINC00899-201ENST00000421538 ZNF446Q9NWS9 450 aa16.29■□□□□ 0.2
LINC00899-201ENST00000421538 CWC25Q9NXE8 425 aaPredicted RBP16.29■□□□□ 0.2
LINC00899-201ENST00000421538 ZBTB1Q9Y2K1 713 aa16.29■□□□□ 0.2
LINC00899-201ENST00000421538 TJP1Q07157 1748 aa16.28■□□□□ 0.2
LINC00899-201ENST00000421538 CYP2C19P33261 490 aa16.28■□□□□ 0.2
LINC00899-201ENST00000421538 G3BP1Q13283 466 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00899-201ENST00000421538 FILIP1Q7Z7B0 1213 aa16.28■□□□□ 0.2
LINC00899-201ENST00000421538 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
LINC00899-201ENST00000421538 RFX5P48382 616 aaPredicted RBP16.28■□□□□ 0.2
LINC00899-201ENST00000421538 STK3Q13188 491 aa16.28■□□□□ 0.2
LINC00899-201ENST00000421538 VPS72Q15906 364 aa16.28■□□□□ 0.2
LINC00899-201ENST00000421538 KCNQ2O43526 872 aa16.27■□□□□ 0.2
LINC00899-201ENST00000421538 FOXO4P98177 505 aa16.27■□□□□ 0.2
LINC00899-201ENST00000421538 TOB2Q14106 344 aaPredicted RBP16.27■□□□□ 0.2
LINC00899-201ENST00000421538 FNBP4Q8N3X1 1017 aaPredicted RBP16.27■□□□□ 0.2
LINC00899-201ENST00000421538 COL15A1P39059 1388 aa16.27■□□□□ 0.19
LINC00899-201ENST00000421538 BECN2A8MW95 431 aa16.27■□□□□ 0.19
LINC00899-201ENST00000421538 CAPN2P17655 700 aa16.27■□□□□ 0.19
LINC00899-201ENST00000421538 BLOC1S2Q6QNY1 142 aa16.27■□□□□ 0.19
LINC00899-201ENST00000421538 ISCA1Q9BUE6 129 aa16.27■□□□□ 0.19
LINC00899-201ENST00000421538 CCZ1BP86790 482 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 CCZ1P86791 482 aaPredicted RBP16.26■□□□□ 0.19
LINC00899-201ENST00000421538 MAPK8IP2Q13387 824 aaPredicted RBP16.26■□□□□ 0.19
LINC00899-201ENST00000421538 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 IQCB1Q15051 598 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 HLFQ16534 295 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 CCDC191Q8NCU4 936 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 GTF3C6Q969F1 213 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 CHGBP05060 677 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 H2AFXP16104 143 aaPredicted RBP16.26■□□□□ 0.19
LINC00899-201ENST00000421538 RPS6KB1P23443 525 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 PSMA5P28066 241 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
LINC00899-201ENST00000421538 SNRKQ9NRH2 765 aa16.26■□□□□ 0.19
LINC00899-201ENST00000421538 MED23Q9ULK4 1368 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 HNRNPH2P55795 449 aaKnown RBP16.25■□□□□ 0.19
LINC00899-201ENST00000421538 PLCD3Q8N3E9 789 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 NDUFB9Q9Y6M9 179 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 HIP1O00291 1037 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 SNW1Q13573 536 aaKnown RBP16.25■□□□□ 0.19
LINC00899-201ENST00000421538 STX1AQ16623 288 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 ERCC6LQ2NKX8 1250 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 PGBD1Q96JS3 809 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 TRERF1Q96PN7 1200 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 COPRSQ9NQ92 184 aa16.25■□□□□ 0.19
LINC00899-201ENST00000421538 MAP3K15Q6ZN16 1313 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 TEX35Q5T0J7 233 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 C11orf57Q6ZUT1 292 aaPredicted RBP16.24■□□□□ 0.19
LINC00899-201ENST00000421538 KCND1Q9NSA2 647 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 FHOD1Q9Y613 1164 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 GSDMDP57764 484 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 ANKRD1Q15327 319 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 AEBP2Q6ZN18 517 aaPredicted RBP16.24■□□□□ 0.19
LINC00899-201ENST00000421538 USP21Q9UK80 565 aa16.24■□□□□ 0.19
LINC00899-201ENST00000421538 SPATA31A6Q5VVP1 1343 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 JAK2O60674 1132 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 HSPA1LP34931 641 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 CLCN6P51797 869 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 ITPK1Q13572 414 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 GIGYF2Q6Y7W6 1299 aaKnown RBP16.23■□□□□ 0.19
LINC00899-201ENST00000421538 TRIM34Q9BYJ4 488 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 L2HGDHQ9H9P8 463 aa16.23■□□□□ 0.19
LINC00899-201ENST00000421538 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.23■□□□□ 0.19
LINC00899-201ENST00000421538 LOC102724428A0A0B4J2F2 783 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 CTAGE5O15320 804 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 TAF5LO75529 589 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 PNMA6AP0CW24 399 aaPredicted RBP16.22■□□□□ 0.19
LINC00899-201ENST00000421538 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 SIK1P57059 783 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 PTF1AQ7RTS3 328 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 TBC1D2BQ9UPU7 963 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 GPTP24298 496 aa16.22■□□□□ 0.19
LINC00899-201ENST00000421538 TRIM28Q13263 835 aaKnown RBP16.22■□□□□ 0.19
LINC00899-201ENST00000421538 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
LINC00899-201ENST00000421538 ARGLU1Q9NWB6 273 aaPredicted RBP16.22■□□□□ 0.19
LINC00899-201ENST00000421538 ARHGAP29Q52LW3 1261 aa16.21■□□□□ 0.19
LINC00899-201ENST00000421538 SYNE4Q8N205 404 aa16.21■□□□□ 0.19
LINC00899-201ENST00000421538 DDX11Q96FC9 970 aa16.21■□□□□ 0.19
LINC00899-201ENST00000421538 FAM89AQ96GI7 184 aa16.21■□□□□ 0.19
LINC00899-201ENST00000421538 PALLDQ8WX93 1383 aa16.21■□□□□ 0.19
LINC00899-201ENST00000421538 TPM4P67936 248 aa16.21■□□□□ 0.18
LINC00899-201ENST00000421538 CCDC129Q6ZRS4 1044 aa16.21■□□□□ 0.18
LINC00899-201ENST00000421538 CFAP45Q9UL16 551 aa16.21■□□□□ 0.18
LINC00899-201ENST00000421538 IL6STP40189 918 aaPredicted RBP16.2■□□□□ 0.18
LINC00899-201ENST00000421538 TMCO3Q6UWJ1 677 aa16.2■□□□□ 0.18
LINC00899-201ENST00000421538 SYT10Q6XYQ8 523 aa16.2■□□□□ 0.18
LINC00899-201ENST00000421538 SEC62Q99442 399 aaKnown RBP16.2■□□□□ 0.18
LINC00899-201ENST00000421538 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
LINC00899-201ENST00000421538 PLA2G4AP47712 749 aa16.2■□□□□ 0.18
LINC00899-201ENST00000421538 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms