RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 PSME4Q14997 1843 aa7.48□□□□□ -1.21
HDAC8-212ENST00000421523 TESPA1A2RU30 521 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-212ENST00000421523 PPP1R12BO60237 982 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-212ENST00000421523 GNRH1P01148 92 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 CTGFP29279 349 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 PRMT2P55345 433 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 MDM2Q00987 491 aaPredicted RBP7.47□□□□□ -1.21
HDAC8-212ENST00000421523 PARP10Q53GL7 1025 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 SLC10A5Q5PT55 438 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 OGFOD1Q8N543 542 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 NECTIN2Q92692 538 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 CELF1Q92879 486 aaKnown RBP7.47□□□□□ -1.21
HDAC8-212ENST00000421523 OPTNQ96CV9 577 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 TRIM47Q96LD4 638 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 SRRDQ9UH36 339 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 OTOFQ9HC10 1997 aa7.47□□□□□ -1.21
HDAC8-212ENST00000421523 REV3LO60673 3130 aa7.46□□□□□ -1.21
HDAC8-212ENST00000421523 USP17L3A6NCW0 530 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 USP17L4A6NCW7 530 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 U2SURPO15042 1029 aaKnown RBP7.46□□□□□ -1.22
HDAC8-212ENST00000421523 FMNL1O95466 1100 aaPredicted RBP7.46□□□□□ -1.22
HDAC8-212ENST00000421523 OSBPP22059 807 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 PPP2R1AP30153 589 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 PRKAR2BP31323 418 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 PSMC4P43686 418 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 MAP3K11Q16584 847 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 USP17L1Q7RTZ2 530 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 NECAB2Q7Z6G3 386 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 USP38Q8NB14 1042 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 ADAMTS19Q8TE59 1207 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 MS4A4AQ96JQ5 239 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 DEFB129Q9H1M3 183 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 ANKIB1Q9P2G1 1089 aa7.46□□□□□ -1.22
HDAC8-212ENST00000421523 DLG5Q8TDM6 1919 aa7.45□□□□□ -1.22
HDAC8-212ENST00000421523 COL2A1P02458 1487 aaPredicted RBP7.45□□□□□ -1.22
HDAC8-212ENST00000421523 TLR2O60603 784 aa7.45□□□□□ -1.22
HDAC8-212ENST00000421523 WDHD1O75717 1129 aaPredicted RBP7.45□□□□□ -1.22
HDAC8-212ENST00000421523 IREB2P48200 963 aaKnown RBP7.45□□□□□ -1.22
HDAC8-212ENST00000421523 PRKCZQ05513 592 aa7.45□□□□□ -1.22
HDAC8-212ENST00000421523 GIGYF2Q6Y7W6 1299 aaKnown RBP7.45□□□□□ -1.22
HDAC8-212ENST00000421523 CPA4Q9UI42 421 aa7.45□□□□□ -1.22
HDAC8-212ENST00000421523 CFAP54Q96N23 3096 aa7.45□□□□□ -1.22
HDAC8-212ENST00000421523 COL1A1P02452 1464 aaPredicted RBP7.44□□□□□ -1.22
HDAC8-212ENST00000421523 INHAP05111 366 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 ELNP15502 786 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 KCNA4P22459 653 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 HOXD10P28358 340 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 PODNQ7Z5L7 613 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 ANKRD13AQ8IZ07 590 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 UHRF1Q96T88 793 aaPredicted RBP7.44□□□□□ -1.22
HDAC8-212ENST00000421523 SEMA6BQ9H3T3 888 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 TRMT112Q9UI30 125 aaKnown RBP7.44□□□□□ -1.22
HDAC8-212ENST00000421523 GGA1Q9UJY5 639 aa7.44□□□□□ -1.22
HDAC8-212ENST00000421523 HTATSF1O43719 755 aaKnown RBP7.43□□□□□ -1.22
HDAC8-212ENST00000421523 SLC4A2P04920 1241 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 GTF2A2P52657 109 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 NBPF12Q5TAG4 269 aaPredicted RBP7.43□□□□□ -1.22
HDAC8-212ENST00000421523 MCM10Q7L590 875 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 KIAA0825Q8IV33 1275 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 SLAIN1Q8ND83 568 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 PLEKHF1Q96S99 279 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 C1QTNF1Q9BXJ1 281 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 MIS18AQ9NYP9 233 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 FAM205AQ6ZU69 1335 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 SH3TC1Q8TE82 1336 aa7.43□□□□□ -1.22
HDAC8-212ENST00000421523 DDX60LQ5H9U9 1706 aaKnown RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 CLRN2A0PK11 232 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 ADCY3O60266 1144 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 USP2O75604 605 aaPredicted RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 U2AF1L5P0DN76 240 aaPredicted RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 U2AF1Q01081 240 aaKnown RBP eCLIP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 CNGB1Q14028 1251 aaPredicted RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 DCTN1Q14203 1278 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 SUPT20HL1Q3ZLR7 823 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 DACT2Q5SW24 774 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 NLRP10Q86W26 655 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 PPM1EQ8WY54 764 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 CFAP53Q96M91 514 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 NECAB3Q96P71 396 aaPredicted RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 THUMPD2Q9BTF0 503 aaKnown RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 TTYH1Q9H313 450 aaPredicted RBP7.42□□□□□ -1.22
HDAC8-212ENST00000421523 VEZTQ9HBM0 779 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 TAOK2Q9UL54 1235 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 GABRQQ9UN88 632 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 NUDCQ9Y266 331 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 ADGRA2Q96PE1 1338 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 USP34Q70CQ2 3546 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 C5orf42Q9H799 3197 aa7.42□□□□□ -1.22
HDAC8-212ENST00000421523 UNCXA6NJT0 531 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 BTBD19C9JJ37 291 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 VGLL4Q14135 290 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 IL27Q8NEV9 243 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 LRFN3Q9BTN0 628 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 NBPF3Q9H094 633 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 CRISPLD2Q9H0B8 497 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 PAK6Q9NQU5 681 aaPredicted RBP7.41□□□□□ -1.22
HDAC8-212ENST00000421523 ARIH1Q9Y4X5 557 aaPredicted RBP7.41□□□□□ -1.22
HDAC8-212ENST00000421523 CHD9Q3L8U1 2897 aa7.41□□□□□ -1.22
HDAC8-212ENST00000421523 MRE11P49959 708 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 TAF7Q15545 349 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms