RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 VPS53Q5VIR6 699 aa16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 RUFY3Q7L099 469 aa16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 RBM17Q96I25 401 aaKnown RBP16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 BRIP1Q9BX63 1249 aa16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 PUS7LQ9H0K6 701 aaKnown RBP16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 ZGPATQ8N5A5 531 aaKnown RBP16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
TMEM50B-201ENST00000420455 DUOX1Q9NRD9 1551 aa16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 IGSF3O75054 1194 aa16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 BBOX1O75936 387 aa16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 EZH2Q15910 746 aaKnown RBP16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 SLC15A2Q16348 729 aa16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 TMX3Q96JJ7 454 aa16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 UPF3BQ9BZI7 483 aaKnown RBP16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 PODXL2Q9NZ53 605 aa16.02■□□□□ 0.15
TMEM50B-201ENST00000420455 PDE6AP16499 860 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 KRT32Q14532 448 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 TMC4Q7Z404 712 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 INTS4Q96HW7 963 aaKnown RBP16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 TAF6LQ9Y6J9 622 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 ZMYM6O95789 1325 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 CYP21A2P08686 494 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 PSMA5P28066 241 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 CAVIN4Q5BKX8 364 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 ANO8Q9HCE9 1232 aaPredicted RBP16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 GNL3LQ9NVN8 582 aaKnown RBP16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 XDHP47989 1333 aa16.01■□□□□ 0.15
TMEM50B-201ENST00000420455 GYG1P46976 350 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 PKP1Q13835 747 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 SLC9C2Q5TAH2 1124 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 TMED8Q6PL24 325 aaPredicted RBP16■□□□□ 0.15
TMEM50B-201ENST00000420455 RPGRQ92834 1020 aaKnown RBP16■□□□□ 0.15
TMEM50B-201ENST00000420455 WWC3Q9ULE0 1092 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 DENND2AQ9ULE3 1009 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 HSP90AA1P07900 732 aaKnown RBP16■□□□□ 0.15
TMEM50B-201ENST00000420455 CASTP20810 708 aaKnown RBP16■□□□□ 0.15
TMEM50B-201ENST00000420455 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
TMEM50B-201ENST00000420455 NPHP1O15259 732 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 KLRK1P26718 216 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 JAKMIP1Q96N16 626 aaKnown RBP16■□□□□ 0.15
TMEM50B-201ENST00000420455 ZNF532Q9HCE3 1301 aa16■□□□□ 0.15
TMEM50B-201ENST00000420455 TIAM2Q8IVF5 1701 aa15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 GSE1Q14687 1217 aa15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 CYP46A1Q9Y6A2 500 aa15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 AK2P54819 239 aa15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 EN1Q05925 392 aaPredicted RBP15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 MAP3K12Q12852 859 aa15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 COL9A3Q14050 684 aaPredicted RBP15.99■□□□□ 0.15
TMEM50B-201ENST00000420455 GPAA1O43292 621 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 SRGNP10124 158 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 RPS6KB1P23443 525 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 KCNJ4P48050 445 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 ALX1Q15699 326 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 SALL1Q9NSC2 1324 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 DLEC1Q9Y238 1755 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 HIBADHP31937 336 aaKnown RBP15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 CLEC17AQ6ZS10 378 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 FBXL16Q8N461 479 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 STRBPQ96SI9 672 aaKnown RBP15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 PDRG1Q9NUG6 133 aa15.98■□□□□ 0.15
TMEM50B-201ENST00000420455 WASHC4Q2M389 1173 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 LIMCH1Q9UPQ0 1083 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 ZDHHC9Q9Y397 364 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 CCDC88AQ3V6T2 1871 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 IDH1O75874 414 aaKnown RBP15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 MMP10P09238 476 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 GPSM2P81274 684 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 STOX1Q6ZVD7 989 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 SP8Q8IXZ3 490 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 CTNNA3Q9UI47 895 aa15.97■□□□□ 0.15
TMEM50B-201ENST00000420455 NPR1P16066 1061 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 TXNRD3Q86VQ6 643 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 PARP3Q9Y6F1 533 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 PDE6BP35913 854 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 SLC51AQ86UW1 340 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 AGXT2Q9BYV1 514 aa15.96■□□□□ 0.15
TMEM50B-201ENST00000420455 FGAP02671 866 aa15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 HMGB1P09429 215 aaKnown RBP15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 CPA1P15085 419 aa15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 MAGEB6Q8N7X4 407 aa15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 TDRD7Q8NHU6 1098 aaKnown RBP15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 NEK1Q96PY6 1258 aa15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 STK32BQ9NY57 414 aa15.96■□□□□ 0.14
TMEM50B-201ENST00000420455 EXOSC10Q01780 885 aaKnown RBP15.95■□□□□ 0.14
TMEM50B-201ENST00000420455 BLOC1S2Q6QNY1 142 aa15.95■□□□□ 0.14
TMEM50B-201ENST00000420455 ZSCAN31Q96LW9 406 aaPredicted RBP15.95■□□□□ 0.14
TMEM50B-201ENST00000420455 KIF13BQ9NQT8 1826 aa15.95■□□□□ 0.14
TMEM50B-201ENST00000420455 TOB2Q14106 344 aaPredicted RBP15.95■□□□□ 0.14
TMEM50B-201ENST00000420455 ZNF384Q8TF68 577 aa15.95■□□□□ 0.14
TMEM50B-201ENST00000420455 ANKRD1Q15327 319 aa15.94■□□□□ 0.14
TMEM50B-201ENST00000420455 ATP6V0A2Q9Y487 856 aa15.94■□□□□ 0.14
TMEM50B-201ENST00000420455 IL1R1P14778 569 aa15.94■□□□□ 0.14
TMEM50B-201ENST00000420455 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
TMEM50B-201ENST00000420455 SH2B1Q9NRF2 756 aaPredicted RBP15.94■□□□□ 0.14
TMEM50B-201ENST00000420455 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
TMEM50B-201ENST00000420455 PATL2C9JE40 543 aaKnown RBP15.93■□□□□ 0.14
TMEM50B-201ENST00000420455 E7EWF7 191 aa15.93■□□□□ 0.14
TMEM50B-201ENST00000420455 GNAT2P19087 354 aa15.93■□□□□ 0.14
TMEM50B-201ENST00000420455 BAG6P46379 1132 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms