RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
SEMA4D-204ENST00000420101 PROM2Q8N271 834 aa17.42■□□□□ 0.38
SEMA4D-204ENST00000420101 FAM227BQ96M60 508 aa17.42■□□□□ 0.38
SEMA4D-204ENST00000420101 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
SEMA4D-204ENST00000420101 CARMIL3Q8ND23 1372 aa17.41■□□□□ 0.38
SEMA4D-204ENST00000420101 RTL9Q8NET4 1388 aa17.41■□□□□ 0.38
SEMA4D-204ENST00000420101 ABCC12Q96J65 1359 aa17.41■□□□□ 0.38
SEMA4D-204ENST00000420101 TAF5LO75529 589 aa17.41■□□□□ 0.38
SEMA4D-204ENST00000420101 CNBD1Q8NA66 436 aa17.41■□□□□ 0.38
SEMA4D-204ENST00000420101 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
SEMA4D-204ENST00000420101 KCNJ4P48050 445 aa17.4■□□□□ 0.38
SEMA4D-204ENST00000420101 VGLL2Q8N8G2 317 aa17.4■□□□□ 0.38
SEMA4D-204ENST00000420101 LPIN2Q92539 896 aa17.4■□□□□ 0.38
SEMA4D-204ENST00000420101 DDX60Q8IY21 1712 aaKnown RBP17.4■□□□□ 0.38
SEMA4D-204ENST00000420101 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
SEMA4D-204ENST00000420101 PAXBP1Q9Y5B6 917 aa17.4■□□□□ 0.38
SEMA4D-204ENST00000420101 GYS1P13807 737 aa17.39■□□□□ 0.37
SEMA4D-204ENST00000420101 CHRNDQ07001 517 aa17.39■□□□□ 0.37
SEMA4D-204ENST00000420101 USP48Q86UV5 1035 aa17.39■□□□□ 0.37
SEMA4D-204ENST00000420101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.39■□□□□ 0.37
SEMA4D-204ENST00000420101 ARID3AQ99856 593 aa17.39■□□□□ 0.37
SEMA4D-204ENST00000420101 RAD50Q92878 1312 aa17.38■□□□□ 0.37
SEMA4D-204ENST00000420101 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
SEMA4D-204ENST00000420101 RIOK3O14730 519 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-204ENST00000420101 LSG1Q9H089 658 aaKnown RBP17.38■□□□□ 0.37
SEMA4D-204ENST00000420101 TTC12Q9H892 705 aaPredicted RBP17.38■□□□□ 0.37
SEMA4D-204ENST00000420101 SMTNL1A8MU46 457 aa17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 ST5P78524 1137 aa17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 LRRFIP1Q32MZ4 808 aaKnown RBP17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 RPAP1Q9BWH6 1393 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 SLC20A2Q08357 652 aa17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 BBXQ8WY36 941 aaPredicted RBP17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 C4AP0C0L4 1744 aa17.37■□□□□ 0.37
SEMA4D-204ENST00000420101 LAMB2P55268 1798 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 SNAP23O00161 211 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 SERPINB2P05120 415 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 UQCRFS1P1P0C7P4 283 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 ZAP70P43403 619 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 ZNF827Q17R98 1081 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 CCDC102BQ68D86 513 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 FUCA2Q9BTY2 467 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 BSDC1Q9NW68 430 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 PALD1Q9ULE6 856 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 MORC2Q9Y6X9 1032 aaPredicted RBP17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 RFX7Q2KHR2 1363 aa17.36■□□□□ 0.37
SEMA4D-204ENST00000420101 HSPA4P34932 840 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 RPS8P62241 208 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 PTH1RQ03431 593 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 SCARF1Q14162 830 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 ZNF771Q7L3S4 317 aaPredicted RBP17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 CCDC171Q6TFL3 1326 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 FGFR2P21802 821 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 PHKA1P46020 1223 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 MCMDC2Q4G0Z9 681 aa17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 DDX41Q9UJV9 622 aaKnown RBP17.35■□□□□ 0.37
SEMA4D-204ENST00000420101 LRP5O75197 1615 aa17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 MCAMP43121 646 aa17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 PRR5LQ6MZQ0 368 aa17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 PRPF40BQ6NWY9 871 aaKnown RBP17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 PI16Q6UXB8 463 aa17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 CTNNA3Q9UI47 895 aa17.34■□□□□ 0.37
SEMA4D-204ENST00000420101 RNF113AO15541 343 aaKnown RBP17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 CHGBP05060 677 aa17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 WASHC4Q2M389 1173 aa17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 FLAD1Q8NFF5 587 aa17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 RPGRQ92834 1020 aaKnown RBP17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 AKT1S1Q96B36 256 aa17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 MINPP1Q9UNW1 487 aa17.33■□□□□ 0.37
SEMA4D-204ENST00000420101 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 SF3B2Q13435 895 aaKnown RBP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 TTF1Q15361 905 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 CCDC129Q6ZRS4 1044 aa17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 ZNF830Q96NB3 372 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 SEC62Q99442 399 aaKnown RBP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 TSPYL1Q9H0U9 437 aa17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 RBM8AQ9Y5S9 174 aaKnown RBP17.33■□□□□ 0.36
SEMA4D-204ENST00000420101 COL24A1Q17RW2 1714 aa17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 GADD45BO75293 160 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 CCDC192P0DO97 292 aa17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 ZKSCAN1P17029 563 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 U2AF2P26368 475 aaKnown RBP eCLIP17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 TM4SF1P30408 202 aa17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 VPS37DQ86XT2 251 aa17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 COL23A1Q86Y22 540 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 ZNF512BQ96KM6 892 aaPredicted RBP17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 HELLSQ9NRZ9 838 aa17.32■□□□□ 0.36
SEMA4D-204ENST00000420101 ARID4AP29374 1257 aaPredicted RBP17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 BCAMP50895 628 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 SLFNL1Q499Z3 407 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 SNX14Q9Y5W7 946 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 IDH1O75874 414 aaKnown RBP17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 ZFYP08048 801 aaPredicted RBP17.31■□□□□ 0.36
SEMA4D-204ENST00000420101 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 305.4 ms