RNA–Protein interactions for RNA: ENST00000419890.3

TVP23C-202, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-202ENST00000419890 PDCL2Q8N4E4 241 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 OTUD7AQ8TE49 926 aaPredicted RBP8.36□□□□□ -1.07
TVP23C-202ENST00000419890 ANKRD7Q92527 254 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 MEIS3Q99687 375 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 CHMP4AQ9BY43 222 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 NSFL1CQ9UNZ2 370 aaKnown RBP8.36□□□□□ -1.07
TVP23C-202ENST00000419890 EMILIN1Q9Y6C2 1016 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.36□□□□□ -1.07
TVP23C-202ENST00000419890 NWD2Q9ULI1 1742 aa8.36□□□□□ -1.07
TVP23C-202ENST00000419890 CPDO75976 1380 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 MAP3K5Q99683 1374 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 ELP1O95163 1332 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 SPATA31A5Q5VU36 1347 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 SPATA31A7Q8IWB4 1347 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 USP42Q9H9J4 1324 aaKnown RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 PIK3C2AO00443 1686 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 ADCY5O95622 1261 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 CAVIN2O95810 425 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 ZSCAN22P10073 491 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 DNTTIP2Q5QJE6 756 aaKnown RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 LARP1Q6PKG0 1096 aaKnown RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 ARHGEF25Q86VW2 580 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 C16orf71Q8IYS4 520 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 KIAA1524Q8TCG1 905 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 CCDC102AQ96A19 550 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 ZSCAN31Q96LW9 406 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 TTC14Q96N46 770 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 THUMPD2Q9BTF0 503 aaKnown RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 GPCPD1Q9NPB8 672 aa8.35□□□□□ -1.07
TVP23C-202ENST00000419890 SH2B1Q9NRF2 756 aaPredicted RBP8.35□□□□□ -1.07
TVP23C-202ENST00000419890 F13A1P00488 732 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 ZSCAN20P17040 1043 aaPredicted RBP8.34□□□□□ -1.07
TVP23C-202ENST00000419890 ATP8B2P98198 1209 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 MPNDQ8N594 471 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 TM6SF1Q9BZW5 370 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 EVA1BQ9NVM1 165 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 GLI3P10071 1580 aa8.34□□□□□ -1.07
TVP23C-202ENST00000419890 CAMTA1Q9Y6Y1 1673 aa8.34□□□□□ -1.08
TVP23C-202ENST00000419890 SPATA31A1Q5TZJ5 1347 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 SGSM2O43147 1006 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 STX6O43752 255 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 SMARCA5O60264 1052 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-202ENST00000419890 CCDC192P0DO97 292 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 CSB-PGBD3P0DP91 1061 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 VSIG8P0DPA2 414 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 FDX1P10109 184 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 GABPB1Q06547 395 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-202ENST00000419890 PTPRNQ16849 979 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 TOM1L2Q6ZVM7 507 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 KRT27Q7Z3Y8 459 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 NRAPQ86VF7 1730 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 RNF214Q8ND24 703 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 RTF1Q92541 710 aaKnown RBP8.33□□□□□ -1.08
TVP23C-202ENST00000419890 BAP1Q92560 729 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 KCNB2Q92953 911 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 KLF16Q9BXK1 252 aaPredicted RBP8.33□□□□□ -1.08
TVP23C-202ENST00000419890 ANO2Q9NQ90 1003 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 SLIT3O75094 1523 aa8.33□□□□□ -1.08
TVP23C-202ENST00000419890 TTC41PQ6P2S7 1318 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 ELL2O00472 640 aaPredicted RBP8.32□□□□□ -1.08
TVP23C-202ENST00000419890 TIMP2P16035 220 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 FBLN1P23142 703 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 CDC25BP30305 580 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 NNTQ13423 1086 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 EIF4A2Q14240 407 aaKnown RBP8.32□□□□□ -1.08
TVP23C-202ENST00000419890 LINC01559Q495D7 138 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 HSP90AB4PQ58FF6 505 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 MRPL14Q6P1L8 145 aaKnown RBP8.32□□□□□ -1.08
TVP23C-202ENST00000419890 NUTM1Q86Y26 1132 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 SSH3Q8TE77 659 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 PALD1Q9ULE6 856 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 LIMCH1Q9UPQ0 1083 aa8.32□□□□□ -1.08
TVP23C-202ENST00000419890 SOBPA7XYQ1 873 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 SMTNL1A8MU46 457 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 C6orf229H3BNL8 230 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 NEMFO60524 1076 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 VPS53Q5VIR6 699 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 CCDC30Q5VVM6 783 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 RBM43Q6ZSC3 357 aaKnown RBP8.31□□□□□ -1.08
TVP23C-202ENST00000419890 CNTROBQ8N137 903 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 ZNF511Q8NB15 262 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 RUFY2Q8WXA3 655 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 ALDH8A1Q9H2A2 487 aaPredicted RBP8.31□□□□□ -1.08
TVP23C-202ENST00000419890 DDX19AQ9NUU7 478 aaKnown RBP8.31□□□□□ -1.08
TVP23C-202ENST00000419890 CGNQ9P2M7 1197 aaKnown RBP8.31□□□□□ -1.08
TVP23C-202ENST00000419890 SMC3Q9UQE7 1217 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 FLT4P35916 1363 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 BRWD3Q6RI45 1802 aa8.31□□□□□ -1.08
TVP23C-202ENST00000419890 KDM3BQ7LBC6 1761 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 GADD45BO75293 160 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 HOXB7P09629 217 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 PDCP20941 246 aa8.3□□□□□ -1.08
TVP23C-202ENST00000419890 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
TVP23C-202ENST00000419890 AMPHP49418 695 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms