RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 FRRS1LQ9P0K9 344 aa8.72□□□□□ -1.01
VPS45-203ENST00000419023 MKL2Q9ULH7 1088 aa8.72□□□□□ -1.01
VPS45-203ENST00000419023 AMOTL2Q9Y2J4 779 aa8.72□□□□□ -1.01
VPS45-203ENST00000419023 ACPPP15309 386 aa8.71□□□□□ -1.02
VPS45-203ENST00000419023 ATP11AP98196 1134 aa8.71□□□□□ -1.02
VPS45-203ENST00000419023 TRIM26Q12899 539 aaPredicted RBP8.71□□□□□ -1.02
VPS45-203ENST00000419023 BEND7Q8N7W2 519 aaPredicted RBP8.71□□□□□ -1.02
VPS45-203ENST00000419023 CEP120Q8N960 986 aa8.71□□□□□ -1.02
VPS45-203ENST00000419023 ALKBH8Q96BT7 664 aaKnown RBP8.71□□□□□ -1.02
VPS45-203ENST00000419023 SCARF2Q96GP6 870 aaPredicted RBP8.71□□□□□ -1.02
VPS45-203ENST00000419023 RIMS1Q86UR5 1692 aaKnown RBP8.71□□□□□ -1.02
VPS45-203ENST00000419023 ABCA9Q8IUA7 1624 aa8.7□□□□□ -1.02
VPS45-203ENST00000419023 CTTNBP2Q8WZ74 1663 aa8.7□□□□□ -1.02
VPS45-203ENST00000419023 TREHO43280 583 aa8.7□□□□□ -1.02
VPS45-203ENST00000419023 AFF1P51825 1210 aaKnown RBP8.7□□□□□ -1.02
VPS45-203ENST00000419023 PLCB3Q01970 1234 aa8.7□□□□□ -1.02
VPS45-203ENST00000419023 DSC3Q14574 896 aa8.7□□□□□ -1.02
VPS45-203ENST00000419023 RASSF4Q9H2L5 321 aa8.7□□□□□ -1.02
VPS45-203ENST00000419023 EIF1AYO14602 144 aaKnown RBP8.69□□□□□ -1.02
VPS45-203ENST00000419023 CPNE3O75131 537 aaKnown RBP8.69□□□□□ -1.02
VPS45-203ENST00000419023 TRPA1O75762 1119 aa8.69□□□□□ -1.02
VPS45-203ENST00000419023 COL9A3Q14050 684 aaPredicted RBP8.69□□□□□ -1.02
VPS45-203ENST00000419023 CCDC27Q2M243 656 aa8.69□□□□□ -1.02
VPS45-203ENST00000419023 CEP135Q66GS9 1140 aa8.69□□□□□ -1.02
VPS45-203ENST00000419023 CSRNP1Q96S65 589 aa8.69□□□□□ -1.02
VPS45-203ENST00000419023 PRDM6Q9NQX0 595 aa8.69□□□□□ -1.02
VPS45-203ENST00000419023 LATS2Q9NRM7 1088 aa8.69□□□□□ -1.02
VPS45-203ENST00000419023 GNB5O14775 395 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 EDN3P14138 238 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 GRIK5Q16478 980 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 GDF6Q6KF10 455 aaPredicted RBP8.68□□□□□ -1.02
VPS45-203ENST00000419023 TTC9Q92623 222 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 TRIM11Q96F44 468 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 YEATS2Q9ULM3 1422 aa8.68□□□□□ -1.02
VPS45-203ENST00000419023 NID1P14543 1247 aa8.67□□□□□ -1.02
VPS45-203ENST00000419023 FHOD3Q2V2M9 1422 aa8.67□□□□□ -1.02
VPS45-203ENST00000419023 GALNT12Q8IXK2 581 aa8.67□□□□□ -1.02
VPS45-203ENST00000419023 PBX4Q9BYU1 374 aa8.67□□□□□ -1.02
VPS45-203ENST00000419023 DNAJC25Q9H1X3 360 aa8.67□□□□□ -1.02
VPS45-203ENST00000419023 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
VPS45-203ENST00000419023 EFCAB5A4FU69 1503 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 ARHGEF40Q8TER5 1519 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 MAGI2Q86UL8 1455 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 ANKRD33BA6NCL7 494 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 PIK3R2O00459 728 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 SMNDC1O75940 238 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS45-203ENST00000419023 IRS1P35568 1242 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 MAPK8P45983 427 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 PEAR1Q5VY43 1037 aaPredicted RBP8.66□□□□□ -1.02
VPS45-203ENST00000419023 HHIPQ96QV1 700 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 OSMRQ99650 979 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 ZKSCAN3Q9BRR0 538 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 PLVAPQ9BX97 442 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 DZANK1Q9NVP4 752 aa8.66□□□□□ -1.02
VPS45-203ENST00000419023 CFAP74Q9C0B2 1584 aa8.65□□□□□ -1.02
VPS45-203ENST00000419023 PNMA6FA0A0J9YX94 578 aa8.65□□□□□ -1.02
VPS45-203ENST00000419023 FMR1Q06787 632 aaKnown RBP eCLIP8.65□□□□□ -1.02
VPS45-203ENST00000419023 TMCO4Q5TGY1 634 aa8.65□□□□□ -1.02
VPS45-203ENST00000419023 DNAJC14Q6Y2X3 702 aaPredicted RBP8.65□□□□□ -1.02
VPS45-203ENST00000419023 CCDC74AQ96AQ1 378 aa8.65□□□□□ -1.02
VPS45-203ENST00000419023 POP1Q99575 1024 aaKnown RBP8.65□□□□□ -1.02
VPS45-203ENST00000419023 LACRTQ9GZZ8 138 aa8.65□□□□□ -1.02
VPS45-203ENST00000419023 NPHS2Q9NP85 383 aa8.65□□□□□ -1.02
VPS45-203ENST00000419023 ZFYVE16Q7Z3T8 1539 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 UHRF1BP1Q6BDS2 1440 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 NFKBIEO00221 500 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 CEBPAP49715 358 aaPredicted RBP8.64□□□□□ -1.03
VPS45-203ENST00000419023 ENOX2Q16206 610 aaKnown RBP8.64□□□□□ -1.03
VPS45-203ENST00000419023 TRAPPC3LQ5T215 181 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 MSL1Q68DK7 614 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 ADAMTSL4Q6UY14 1074 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 DMRTC2Q8IXT2 367 aaPredicted RBP8.64□□□□□ -1.03
VPS45-203ENST00000419023 IL22RA1Q8N6P7 574 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 FRMPD1Q5SYB0 1578 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 SPATA31D1Q6ZQQ2 1576 aa8.64□□□□□ -1.03
VPS45-203ENST00000419023 RAPGEF6Q8TEU7 1601 aa8.63□□□□□ -1.03
VPS45-203ENST00000419023 RNF225M0QZC1 329 aaPredicted RBP8.63□□□□□ -1.03
VPS45-203ENST00000419023 PDE2AO00408 941 aaPredicted RBP8.63□□□□□ -1.03
VPS45-203ENST00000419023 P4HBP07237 508 aaKnown RBP8.63□□□□□ -1.03
VPS45-203ENST00000419023 BAG6P46379 1132 aa8.63□□□□□ -1.03
VPS45-203ENST00000419023 WFDC8Q8IUA0 241 aa8.63□□□□□ -1.03
VPS45-203ENST00000419023 EPS8L3Q8TE67 593 aaKnown RBP8.63□□□□□ -1.03
VPS45-203ENST00000419023 A0A1W2PP55 124 aa8.62□□□□□ -1.03
VPS45-203ENST00000419023 EFCAB2Q5VUJ9 269 aa8.62□□□□□ -1.03
VPS45-203ENST00000419023 SETDB2Q96T68 719 aa8.62□□□□□ -1.03
VPS45-203ENST00000419023 NOP53Q9NZM5 478 aaKnown RBP8.62□□□□□ -1.03
VPS45-203ENST00000419023 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
VPS45-203ENST00000419023 CDK11AQ9UQ88 783 aaPredicted RBP8.62□□□□□ -1.03
VPS45-203ENST00000419023 PRXQ9BXM0 1461 aa8.62□□□□□ -1.03
VPS45-203ENST00000419023 SCAPERQ9BY12 1400 aa8.62□□□□□ -1.03
VPS45-203ENST00000419023 FAM229AH3BQW9 127 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 COL8A1P27658 744 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 PI16Q6UXB8 463 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 TMEM102Q8N9M5 508 aaPredicted RBP8.61□□□□□ -1.03
VPS45-203ENST00000419023 NXPE3Q969Y0 559 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 EHD4Q9H223 541 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 ATP10AO60312 1499 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 PTPRTO14522 1441 aa8.61□□□□□ -1.03
VPS45-203ENST00000419023 SPDYE3A6NKU9 549 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms