RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GNL2Q13823 731 aaKnown RBP13.89□□□□□ -0.19
LIMK1-202ENST00000418310 IQCB1Q15051 598 aa13.89□□□□□ -0.19
LIMK1-202ENST00000418310 MICU3Q86XE3 530 aa13.89□□□□□ -0.19
LIMK1-202ENST00000418310 PHKBQ93100 1093 aa13.89□□□□□ -0.19
LIMK1-202ENST00000418310 RCOR1Q9UKL0 485 aa13.89□□□□□ -0.19
LIMK1-202ENST00000418310 UBE2Q2LH0YL09 131 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 DPCR1Q3MIW9 517 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 DNAJC10Q8IXB1 793 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 TOMM22Q9NS69 142 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 SKILP12757 684 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 EVA1CP58658 441 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 FAM160A1Q05DH4 1040 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 CCDC94Q9BW85 323 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-202ENST00000418310 ASAP1Q9ULH1 1129 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 USP54Q70EL1 1684 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 KIF28PB7ZC32 967 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 GPAA1O43292 621 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 NAA16Q6N069 864 aaPredicted RBP13.88□□□□□ -0.19
LIMK1-202ENST00000418310 MRPS27Q92552 414 aaKnown RBP13.88□□□□□ -0.19
LIMK1-202ENST00000418310 CNNM1Q9NRU3 951 aa13.88□□□□□ -0.19
LIMK1-202ENST00000418310 AFDNP55196 1824 aaKnown RBP13.87□□□□□ -0.19
LIMK1-202ENST00000418310 LDHAL6AQ6ZMR3 332 aa13.87□□□□□ -0.19
LIMK1-202ENST00000418310 RBM43Q6ZSC3 357 aaKnown RBP13.87□□□□□ -0.19
LIMK1-202ENST00000418310 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
LIMK1-202ENST00000418310 ZNF213O14771 459 aa13.87□□□□□ -0.19
LIMK1-202ENST00000418310 PDIA4P13667 645 aaKnown RBP13.87□□□□□ -0.19
LIMK1-202ENST00000418310 IFIT5Q13325 482 aaKnown RBP13.87□□□□□ -0.19
LIMK1-202ENST00000418310 SYNE3Q6ZMZ3 975 aa13.87□□□□□ -0.19
LIMK1-202ENST00000418310 CEP57L1Q8IYX8 460 aa13.87□□□□□ -0.19
LIMK1-202ENST00000418310 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
LIMK1-202ENST00000418310 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
LIMK1-202ENST00000418310 FOXP2O15409 715 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 ATP2B1P20020 1258 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 CCDC191Q8NCU4 936 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 PALLDQ8WX93 1383 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
LIMK1-202ENST00000418310 RRP12Q5JTH9 1297 aaKnown RBP13.86□□□□□ -0.19
LIMK1-202ENST00000418310 SPECC1Q5M775 1068 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 SLC9C2Q5TAH2 1124 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 DHX40Q8IX18 779 aaKnown RBP13.86□□□□□ -0.19
LIMK1-202ENST00000418310 ANO10Q9NW15 660 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 MTERF4Q7Z6M4 381 aaKnown RBP13.86□□□□□ -0.19
LIMK1-202ENST00000418310 LRRC8AQ8IWT6 810 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 CCDC112Q8NEF3 446 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 GREM2Q9H772 168 aa13.86□□□□□ -0.19
LIMK1-202ENST00000418310 B4E1Z4 1266 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 ANTXR2P58335 489 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 HLFQ16534 295 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 NFXL1Q6ZNB6 911 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 TMC6Q7Z403 805 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 IFNKQ9P0W0 207 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 SPTLC2O15270 562 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 GOLGA8FQ08AF8 430 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 GOLGA8DPQ0D2H9 430 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 CEP135Q66GS9 1140 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 TMOD3Q9NYL9 352 aa13.85□□□□□ -0.19
LIMK1-202ENST00000418310 MCAMP43121 646 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 TRDNQ13061 729 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 ENGASEQ8NFI3 743 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 NCOA7Q8NI08 942 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 ZKSCAN3Q9BRR0 538 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 TBC1D2BQ9UPU7 963 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 PCDH11XQ9BZA7 1347 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 PCDH11YQ9BZA8 1340 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 ITGA6P23229 1130 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 MYSM1Q5VVJ2 828 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 CMTR1Q8N1G2 835 aaKnown RBP13.84□□□□□ -0.19
LIMK1-202ENST00000418310 LINC00301Q8NCQ3 95 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 ZNF274Q96GC6 653 aaPredicted RBP13.84□□□□□ -0.19
LIMK1-202ENST00000418310 CLIC6Q96NY7 704 aa13.84□□□□□ -0.19
LIMK1-202ENST00000418310 GTF2F1P35269 517 aaKnown RBP eCLIP13.83□□□□□ -0.19
LIMK1-202ENST00000418310 NCBP1Q09161 790 aaKnown RBP13.83□□□□□ -0.19
LIMK1-202ENST00000418310 FMR1NBQ8N0W7 255 aaPredicted RBP13.83□□□□□ -0.19
LIMK1-202ENST00000418310 IQSEC3Q9UPP2 1182 aaPredicted RBP13.83□□□□□ -0.19
LIMK1-202ENST00000418310 HPS5Q9UPZ3 1129 aa13.83□□□□□ -0.19
LIMK1-202ENST00000418310 SIPA1L3O60292 1781 aaPredicted RBP13.83□□□□□ -0.19
LIMK1-202ENST00000418310 MRC1P22897 1456 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 SLC3A2P08195 630 aaKnown RBP13.83□□□□□ -0.2
LIMK1-202ENST00000418310 TCIRG1Q13488 830 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 TBC1D10CQ8IV04 446 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 XPO4Q9C0E2 1151 aaKnown RBP13.83□□□□□ -0.2
LIMK1-202ENST00000418310 CTNNA3Q9UI47 895 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 CTAGE5O15320 804 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 IL2RBP14784 551 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 PTPN14Q15678 1187 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 CYB5R4Q7L1T6 521 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 APPBP2Q92624 585 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 ALG1Q9BT22 464 aa13.83□□□□□ -0.2
LIMK1-202ENST00000418310 SALL1Q9NSC2 1324 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 ATP1A3P13637 1013 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 PHKA1P46020 1223 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 FBXO18Q8NFZ0 1043 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 TMX1Q9H3N1 280 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 SCN11AQ9UI33 1791 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 ZNF202O95125 648 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 METAP2P50579 478 aaKnown RBP eCLIP13.82□□□□□ -0.2
LIMK1-202ENST00000418310 CTDSPL2Q05D32 466 aa13.82□□□□□ -0.2
LIMK1-202ENST00000418310 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms