RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 UBASH3AP57075 661 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 PUM3Q15397 648 aaKnown RBP15.15■□□□□ 0.02
BDNF-208ENST00000418212 BEND3Q5T5X7 828 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 TRMT2AQ8IZ69 625 aaKnown RBP15.15■□□□□ 0.02
BDNF-208ENST00000418212 PAF1Q8N7H5 531 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 ZNF521Q96K83 1311 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 KIAA0232Q92628 1395 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 RPS6KB1P23443 525 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 TYRO3Q06418 890 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 TCIRG1Q13488 830 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 CCDC40Q4G0X9 1142 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 TAF3Q5VWG9 929 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 TRIM47Q96LD4 638 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 CCDC87Q9NVE4 849 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 ERCC6L2Q5T890 1561 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 JAK2O60674 1132 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 EIF6P56537 245 aaKnown RBP15.15■□□□□ 0.02
BDNF-208ENST00000418212 GAS2L3Q86XJ1 694 aa15.15■□□□□ 0.02
BDNF-208ENST00000418212 CCDC94Q9BW85 323 aaPredicted RBP15.15■□□□□ 0.02
BDNF-208ENST00000418212 hCG_1642624A0A1W2PR95 340 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 ZSCAN12O43309 604 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 TSG101Q99816 390 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 ZFYVE16Q7Z3T8 1539 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 TNNI2P48788 182 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 RRAGBQ5VZM2 374 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 ARHGEF10O15013 1369 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 GCC2Q8IWJ2 1684 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 UFL1O94874 794 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 HIBADHP31937 336 aaKnown RBP15.14■□□□□ 0.01
BDNF-208ENST00000418212 USP8P40818 1118 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 LRRC24Q50LG9 513 aa15.14■□□□□ 0.01
BDNF-208ENST00000418212 CCDC66A2RUB6 948 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 KIF5CO60282 957 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 PARP10Q53GL7 1025 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 LUZP1Q86V48 1076 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 A0A0D9SFI3 127 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
BDNF-208ENST00000418212 PTH1RQ03431 593 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 PHKBQ93100 1093 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 GNAT2P19087 354 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 MCM7P33993 719 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 STAT6P42226 847 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 SCLT1Q96NL6 688 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 HELLSQ9NRZ9 838 aa15.13■□□□□ 0.01
BDNF-208ENST00000418212 AATFQ9NY61 560 aaKnown RBP eCLIP15.13■□□□□ 0.01
BDNF-208ENST00000418212 GNAQP50148 359 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 CCDC102AQ96A19 550 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 TAF4BQ92750 862 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.12■□□□□ 0.01
BDNF-208ENST00000418212 MMRN2Q9H8L6 949 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 AMPD3Q01432 767 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
BDNF-208ENST00000418212 TEX11Q8IYF3 940 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
BDNF-208ENST00000418212 ERICH4A6NGS2 130 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 SKILP12757 684 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 PKP1Q13835 747 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 RNF216Q9NWF9 866 aaPredicted RBP15.11■□□□□ 0.01
BDNF-208ENST00000418212 MYO5CQ9NQX4 1742 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 ZNF532Q9HCE3 1301 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 MYO1BO43795 1136 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 ERLIN1O75477 346 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 KANK3Q6NY19 840 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 LPIN2Q92539 896 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 ANGEL1Q9UNK9 670 aaKnown RBP15.11■□□□□ 0.01
BDNF-208ENST00000418212 GNG11P61952 73 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 CTDSPL2Q05D32 466 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 SPECC1Q5M775 1068 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 ZKSCAN5Q9Y2L8 839 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 V9GY48 417 aaPredicted RBP15.11■□□□□ 0.01
BDNF-208ENST00000418212 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
BDNF-208ENST00000418212 IGSF1Q8N6C5 1336 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 YEATS4O95619 227 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 ASIC1P78348 528 aa15.11■□□□□ 0.01
BDNF-208ENST00000418212 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
BDNF-208ENST00000418212 PRDM15P57071 1507 aaPredicted RBP15.1■□□□□ 0.01
BDNF-208ENST00000418212 MACROD2A1Z1Q3 448 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 CAVIN2O95810 425 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 TRIM21P19474 475 aaKnown RBP15.1■□□□□ 0.01
BDNF-208ENST00000418212 PTGS1P23219 599 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 HSPA4P34932 840 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 GSDMDP57764 484 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 CCDC148Q8NFR7 591 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 ANKRD2Q9GZV1 360 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 ERVV-2B6SEH9 535 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 NEFHP12036 1026 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 TSC1Q92574 1164 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 MYO6Q9UM54 1294 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 ZNF174Q15697 407 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 UVSSAQ2YD98 709 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 ZBTB9Q96C00 473 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 DENND2AQ9ULE3 1009 aa15.1■□□□□ 0.01
BDNF-208ENST00000418212 VWA3AA6NCI4 1184 aa15.09■□□□□ 0.01
BDNF-208ENST00000418212 ATP5JP18859 108 aa15.09■□□□□ 0.01
BDNF-208ENST00000418212 KIF2AO00139 706 aaPredicted RBP15.09■□□□□ 0.01
BDNF-208ENST00000418212 GADD45BO75293 160 aaPredicted RBP15.09■□□□□ 0.01
BDNF-208ENST00000418212 TAX1BP1Q86VP1 789 aa15.09■□□□□ 0.01
BDNF-208ENST00000418212 SYCP3Q8IZU3 236 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms