RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 SPEF2Q9C093 1822 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 XDHP47989 1333 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 ZNF316A6NFI3 1004 aaPredicted RBP8.91□□□□□ -0.98
COPS3-202ENST00000417352 ATP2B4P23634 1241 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 IGHMBP2P38935 993 aaKnown RBP8.91□□□□□ -0.98
COPS3-202ENST00000417352 CTSWP56202 376 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 SCARF1Q14162 830 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 ANGEL2Q5VTE6 544 aaKnown RBP8.91□□□□□ -0.98
COPS3-202ENST00000417352 ABHD8Q96I13 439 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 MPHOSPH8Q99549 860 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 GBA2Q9HCG7 927 aaPredicted RBP8.91□□□□□ -0.98
COPS3-202ENST00000417352 GGA3Q9NZ52 723 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 PGAP2Q9UHJ9 254 aa8.91□□□□□ -0.98
COPS3-202ENST00000417352 RTL9Q8NET4 1388 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 ASTN2O75129 1339 aaPredicted RBP8.9□□□□□ -0.98
COPS3-202ENST00000417352 USP17L3A6NCW0 530 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 USP17L4A6NCW7 530 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 WTIPA6NIX2 430 aaPredicted RBP8.9□□□□□ -0.98
COPS3-202ENST00000417352 VIL1P09327 827 aaKnown RBP8.9□□□□□ -0.98
COPS3-202ENST00000417352 USP17L8P0C7I0 530 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 RGMBQ6NW40 437 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 RSBN1LQ6PCB5 846 aaPredicted RBP8.9□□□□□ -0.98
COPS3-202ENST00000417352 G2E3Q7L622 706 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 USP17L1Q7RTZ2 530 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 WWC1Q8IX03 1113 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 OGFOD1Q8N543 542 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 GREM2Q9H772 168 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 PODXL2Q9NZ53 605 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 LRRC37AA6NMS7 1700 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 COL4A1P02462 1669 aa8.9□□□□□ -0.98
COPS3-202ENST00000417352 DUOX1Q9NRD9 1551 aa8.9□□□□□ -0.99
COPS3-202ENST00000417352 NEURL1BA8MQ27 555 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 PLIN1O60240 522 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 IGKV5-2P06315 115 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 NOGQ13253 232 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 PRAMEF18Q5VWM3 479 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 FAM9BQ8IZU0 186 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 TTLL11Q8NHH1 800 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 ZIC5Q96T25 663 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 MXD3Q9BW11 206 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 MYH16Q9H6N6 1097 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 MYOZ2Q9NPC6 264 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 CASP8AP2Q9UKL3 1982 aa8.89□□□□□ -0.99
COPS3-202ENST00000417352 CA12O43570 354 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 TRPA1O75762 1119 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 ITGA6P23229 1130 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 CCT4P50991 539 aaKnown RBP8.88□□□□□ -0.99
COPS3-202ENST00000417352 BRPF1P55201 1214 aaPredicted RBP8.88□□□□□ -0.99
COPS3-202ENST00000417352 KIF23Q02241 960 aaPredicted RBP8.88□□□□□ -0.99
COPS3-202ENST00000417352 FLIIQ13045 1269 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 DGKZQ13574 1117 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 PRKG1Q13976 671 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 TAF7LQ5H9L4 462 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 AGBL3Q8NEM8 1001 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 CDCA5Q96FF9 252 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 HHIPL1Q96JK4 782 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
COPS3-202ENST00000417352 MINPP1Q9UNW1 487 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 SCN9AQ15858 1988 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 MYH3P11055 1940 aa8.88□□□□□ -0.99
COPS3-202ENST00000417352 ANKRD18BA2A2Z9 1011 aa8.87□□□□□ -0.99
COPS3-202ENST00000417352 EXOSC9Q06265 439 aaKnown RBP8.87□□□□□ -0.99
COPS3-202ENST00000417352 GCKRQ14397 625 aa8.87□□□□□ -0.99
COPS3-202ENST00000417352 TTLL5Q6EMB2 1281 aa8.87□□□□□ -0.99
COPS3-202ENST00000417352 SLC4A10Q6U841 1118 aa8.87□□□□□ -0.99
COPS3-202ENST00000417352 HELBQ8NG08 1087 aaPredicted RBP8.87□□□□□ -0.99
COPS3-202ENST00000417352 DNAAF4Q8WXU2 420 aa8.87□□□□□ -0.99
COPS3-202ENST00000417352 ANKRD2Q9GZV1 360 aa8.87□□□□□ -0.99
COPS3-202ENST00000417352 ZNF804BA4D1E1 1349 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 FANCIQ9NVI1 1328 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 F6X3S4 739 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 F8W031 263 aaPredicted RBP8.86□□□□□ -0.99
COPS3-202ENST00000417352 UBE2Q2LH0YL09 131 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 H7C1W4 665 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 TAF5LO75529 589 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 SASH1O94885 1247 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 NUDT7P0C024 238 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 NF2P35240 595 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 RBM5P52756 815 aaKnown RBP eCLIP8.86□□□□□ -0.99
COPS3-202ENST00000417352 GTF2IP78347 998 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 IFIT5Q13325 482 aaKnown RBP8.86□□□□□ -0.99
COPS3-202ENST00000417352 FAM161AQ3B820 660 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 NBPF9Q3BBW0 867 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 MOB2Q70IA6 237 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 KIAA0825Q8IV33 1275 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 MCOLN1Q9GZU1 580 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 C9orf78Q9NZ63 289 aaPredicted RBP8.86□□□□□ -0.99
COPS3-202ENST00000417352 HDAC9Q9UKV0 1011 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 AKAP11Q9UKA4 1901 aa8.86□□□□□ -0.99
COPS3-202ENST00000417352 ZEB1P37275 1124 aaPredicted RBP8.85□□□□□ -0.99
COPS3-202ENST00000417352 ZNF280AP59817 542 aaPredicted RBP8.85□□□□□ -0.99
COPS3-202ENST00000417352 CHRNDQ07001 517 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 TXNRD3Q86VQ6 643 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 LINS1Q8NG48 757 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 TMC2Q8TDI7 906 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 COA1Q9GZY4 146 aa8.85□□□□□ -0.99
COPS3-202ENST00000417352 RNF186Q9NXI6 227 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms