RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 GNAT2P19087 354 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 MAP3K9P80192 1104 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 AATFQ9NY61 560 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL12A1-203ENST00000416123 PARD3Q8TEW0 1356 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 GJC1P36383 396 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 MSL1Q68DK7 614 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
COL12A1-203ENST00000416123 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
COL12A1-203ENST00000416123 TCP10Q12799 353 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 RNF216Q9NWF9 866 aaPredicted RBP12.1□□□□□ -0.47
COL12A1-203ENST00000416123 GOLGA6L7A0A1B0GV03 622 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 MAP9Q49MG5 647 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 AOPEPQ8N6M6 819 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 KCNG4Q8TDN1 519 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 RTL9Q8NET4 1388 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 CBX1P83916 185 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 TEX11Q8IYF3 940 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 CCDC171Q6TFL3 1326 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 GNAQP50148 359 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 SNW1Q13573 536 aaKnown RBP12.1□□□□□ -0.47
COL12A1-203ENST00000416123 RUFY3Q7L099 469 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 B4E1Z4 1266 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 DTNBO60941 627 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 LRRC27Q9C0I9 530 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 USP21Q9UK80 565 aa12.1□□□□□ -0.47
COL12A1-203ENST00000416123 POLR3AO14802 1390 aaPredicted RBP12.09□□□□□ -0.47
COL12A1-203ENST00000416123 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 TESK2Q96S53 571 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 ATP10AO60312 1499 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 STX17P56962 302 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 FAM13AO94988 1023 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 PLCG2P16885 1265 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 CFAP74Q9C0B2 1584 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 RTL1A6NKG5 1358 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 EYA3Q99504 573 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 PARP1P09874 1014 aaKnown RBP12.09□□□□□ -0.47
COL12A1-203ENST00000416123 KRT13P13646 458 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 GSDMDP57764 484 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 DACT1Q9NYF0 836 aa12.09□□□□□ -0.47
COL12A1-203ENST00000416123 BIN2Q9UBW5 565 aaPredicted RBP12.09□□□□□ -0.47
COL12A1-203ENST00000416123 DNAJC25Q9H1X3 360 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 CHD1O14646 1710 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 PLBD2Q8NHP8 589 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 METTL22Q9BUU2 404 aaPredicted RBP12.08□□□□□ -0.48
COL12A1-203ENST00000416123 WDR70Q9NW82 654 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 TCOF1Q13428 1488 aaKnown RBP12.08□□□□□ -0.48
COL12A1-203ENST00000416123 CHMP2AO43633 222 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 CEP170Q5SW79 1584 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 SLC52A2Q9HAB3 445 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
COL12A1-203ENST00000416123 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 F13A1P00488 732 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 PUM3Q15397 648 aaKnown RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 ZNF174Q15697 407 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 XAGE2Q96GT9 111 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 CCNT1O60563 726 aaKnown RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 HIBADHP31937 336 aaKnown RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 DDX21Q9NR30 783 aaKnown RBP eCLIP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 PICK1Q9NRD5 415 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 DENND2AQ9ULE3 1009 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 PTPDC1A2A3K4 754 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 TRIM75PA6NK02 468 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 APBA3O96018 575 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 MRPS27Q92552 414 aaKnown RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 KIF2AO00139 706 aaPredicted RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 BACH1O14867 736 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 CEP135Q66GS9 1140 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 DTHD1Q6ZMT9 781 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 GGA1Q9UJY5 639 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 SPTLC2O15270 562 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 GNG11P61952 73 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 PPP4R3BQ5MIZ7 849 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 GBP3Q9H0R5 595 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 EDC4Q6P2E9 1401 aaKnown RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 VWA3AA6NCI4 1184 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 FCHSD1Q86WN1 690 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 OTUD7AQ8TE49 926 aaPredicted RBP12.07□□□□□ -0.48
COL12A1-203ENST00000416123 TAOK3Q9H2K8 898 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 DCTPP1Q9H773 170 aa12.07□□□□□ -0.48
COL12A1-203ENST00000416123 LETM2Q2VYF4 491 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 H0YIN7 160 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 CHMLP26374 656 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 CTDSPL2Q05D32 466 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 MAATS1Q7Z4T9 603 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 GCOM1H8Y6P7 765 aaPredicted RBP12.06□□□□□ -0.48
COL12A1-203ENST00000416123 AKR1B10O60218 316 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 PDE8AO60658 829 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 MYZAPP0CAP1 466 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 HARSP12081 509 aaKnown RBP12.06□□□□□ -0.48
COL12A1-203ENST00000416123 MAEAQ7L5Y9 396 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 ZBTB40Q9NUA8 1239 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 IL13P35225 146 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 USH1GQ495M9 461 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 TNNI3KQ59H18 835 aa12.06□□□□□ -0.48
COL12A1-203ENST00000416123 FPGT-TNNI3KV9GXZ4 949 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms