RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 COL4A1P02462 1669 aa11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 VIL1P09327 827 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 MMP14P50281 582 aa11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 PDE1AP54750 535 aa11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 RSBN1LQ6PCB5 846 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 DCPSQ96C86 337 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 ABT1Q9ULW3 272 aaKnown RBP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 ZBTB12Q9Y330 459 aaPredicted RBP11.29□□□□□ -0.6
CHRNA1-206ENST00000416004 LRRC24Q50LG9 513 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 CDC37L1Q7L3B6 337 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 ERC1Q8IUD2 1116 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 PUS3Q9BZE2 481 aaKnown RBP11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 MROH5Q6ZUA9 1318 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 PASKQ96RG2 1323 aa11.28□□□□□ -0.6
CHRNA1-206ENST00000416004 MX1P20591 662 aa11.27□□□□□ -0.6
CHRNA1-206ENST00000416004 HTRA3P83110 453 aa11.27□□□□□ -0.6
CHRNA1-206ENST00000416004 TFCP2Q12800 502 aa11.27□□□□□ -0.6
CHRNA1-206ENST00000416004 BMP2KLQ5H9B9 411 aa11.27□□□□□ -0.6
CHRNA1-206ENST00000416004 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.6
CHRNA1-206ENST00000416004 ITGBL1O95965 494 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 USP17L8P0C7I0 530 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 KIF4BQ2VIQ3 1234 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 TTC22Q5TAA0 569 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 STRIP1Q5VSL9 837 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 PAXIP1Q6ZW49 1069 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 VPS37DQ86XT2 251 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 EAF2Q96CJ1 260 aaPredicted RBP11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 OSBPL3Q9H4L5 887 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 STAP2Q9UGK3 403 aa11.27□□□□□ -0.61
CHRNA1-206ENST00000416004 SCN9AQ15858 1988 aa11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 A0A1B0GUL6 1792 aa11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 EYA2O00167 538 aa11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 TAF5LO75529 589 aa11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 SEC24BO95487 1268 aa11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 TTLL5Q6EMB2 1281 aa11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 TLR7Q9NYK1 1049 aaKnown RBP11.26□□□□□ -0.61
CHRNA1-206ENST00000416004 UBE4AQ14139 1066 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 DEFB115Q30KQ5 88 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 CAVIN4Q5BKX8 364 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 METTL24Q5JXM2 366 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 AACSQ86V21 672 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 SULF1Q8IWU6 871 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 CLASRPQ8N2M8 674 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 HELBQ8NG08 1087 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 ZNF408Q9H9D4 720 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 MKRN1Q9UHC7 482 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 ZNF609O15014 1411 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 FRAT2O75474 233 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 CIAO1O76071 339 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 ECE1P42892 770 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 PI4K2BQ8TCG2 481 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 CCDC8Q9H0W5 538 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 KCNQ5Q9NR82 932 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 PGAP2Q9UHJ9 254 aa11.25□□□□□ -0.61
CHRNA1-206ENST00000416004 SDSP20132 328 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 IL15P40933 162 aaPredicted RBP11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 GTF2IP78347 998 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 TNNI3KQ59H18 835 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 C15orf52Q6ZUT6 534 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 KRT26Q7Z3Y9 468 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 JMYQ8N9B5 988 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 TRPM4Q8TD43 1214 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 AIDAQ96BJ3 306 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 CD209Q9NNX6 404 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 MYOZ2Q9NPC6 264 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 FPGT-TNNI3KV9GXZ4 949 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 CNTNAP1P78357 1384 aa11.24□□□□□ -0.61
CHRNA1-206ENST00000416004 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 IFIT2P09913 472 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 RIPOR2Q9Y4F9 1068 aa11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 AOX1Q06278 1338 aa11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 MYO1BO43795 1136 aa11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 IFIT1P09914 478 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 ZNF280AP59817 542 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 USP48Q86UV5 1035 aa11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 BEGAINQ9BUH8 593 aa11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 GLIS2Q9BZE0 524 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 DBNLQ9UJU6 430 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
CHRNA1-206ENST00000416004 POLR2AP24928 1970 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 HIBADHP31937 336 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 HIRAP54198 1017 aaPredicted RBP11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 SCARF1Q14162 830 aa11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 DACT2Q5SW24 774 aa11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 C2orf69Q8N8R5 385 aa11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 GGA3Q9NZ52 723 aa11.22□□□□□ -0.61
CHRNA1-206ENST00000416004 SHTN1A0MZ66 631 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 RASSF10A6NK89 507 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 TRAF5O00463 557 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 MAP4K4O95819 1239 aaPredicted RBP11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 SLC5A1P13866 664 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 NF2P35240 595 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 TBC1D9Q6ZT07 1266 aa11.21□□□□□ -0.61
CHRNA1-206ENST00000416004 TXNRD3Q86VQ6 643 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms