RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 KAZALD1Q96I82 304 aa12.13□□□□□ -0.47
LINC01090-201ENST00000415357 GPRC5DQ9NZD1 345 aa12.13□□□□□ -0.47
LINC01090-201ENST00000415357 SCN9AQ15858 1988 aa12.12□□□□□ -0.47
LINC01090-201ENST00000415357 NUDT7P0C024 238 aa12.12□□□□□ -0.47
LINC01090-201ENST00000415357 ATP2B4P23634 1241 aa12.12□□□□□ -0.47
LINC01090-201ENST00000415357 CCT4P50991 539 aaKnown RBP12.12□□□□□ -0.47
LINC01090-201ENST00000415357 TNIP1Q15025 636 aa12.12□□□□□ -0.47
LINC01090-201ENST00000415357 ZNF594Q96JF6 807 aaPredicted RBP12.12□□□□□ -0.47
LINC01090-201ENST00000415357 MPHOSPH8Q99549 860 aa12.12□□□□□ -0.47
LINC01090-201ENST00000415357 A0A1B0GUL6 1792 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 SNAP23O00161 211 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 CT47B1P0C2W7 299 aaPredicted RBP12.11□□□□□ -0.47
LINC01090-201ENST00000415357 KLRK1P26718 216 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
LINC01090-201ENST00000415357 CHRNDQ07001 517 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 IFIT5Q13325 482 aaKnown RBP12.11□□□□□ -0.47
LINC01090-201ENST00000415357 PNMA8AQ86V59 439 aaPredicted RBP12.11□□□□□ -0.47
LINC01090-201ENST00000415357 DNAJC5GQ8N7S2 189 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 TRPM4Q8TD43 1214 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 ADARB2Q9NS39 739 aaKnown RBP12.11□□□□□ -0.47
LINC01090-201ENST00000415357 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
LINC01090-201ENST00000415357 UTYO14607 1347 aa12.11□□□□□ -0.47
LINC01090-201ENST00000415357 MED23Q9ULK4 1368 aa12.1□□□□□ -0.47
LINC01090-201ENST00000415357 TAF5LO75529 589 aa12.1□□□□□ -0.47
LINC01090-201ENST00000415357 ITGBL1O95965 494 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-201ENST00000415357 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-201ENST00000415357 FMR1Q06787 632 aaKnown RBP eCLIP12.1□□□□□ -0.47
LINC01090-201ENST00000415357 LCE2DQ5TA82 110 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-201ENST00000415357 TXNRD3Q86VQ6 643 aa12.1□□□□□ -0.47
LINC01090-201ENST00000415357 HELBQ8NG08 1087 aaPredicted RBP12.1□□□□□ -0.47
LINC01090-201ENST00000415357 BICC1Q9H694 974 aaKnown RBP12.1□□□□□ -0.47
LINC01090-201ENST00000415357 PASKQ96RG2 1323 aa12.1□□□□□ -0.47
LINC01090-201ENST00000415357 CCDC57Q2TAC2 916 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 TAF7LQ5H9L4 462 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 USP50Q70EL3 339 aaPredicted RBP12.09□□□□□ -0.47
LINC01090-201ENST00000415357 CNTROBQ8N137 903 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 ANKRD44Q8N8A2 993 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 MARVELD3Q96A59 401 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 USP44Q9H0E7 712 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
LINC01090-201ENST00000415357 TNNQ9UQP3 1299 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 ZNF804BA4D1E1 1349 aa12.09□□□□□ -0.47
LINC01090-201ENST00000415357 PLIN1O60240 522 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 EGFRP00533 1210 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 KCNJ4P48050 445 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 HIRAP54198 1017 aaPredicted RBP12.08□□□□□ -0.48
LINC01090-201ENST00000415357 BRPF1P55201 1214 aaPredicted RBP12.08□□□□□ -0.48
LINC01090-201ENST00000415357 LDHAL6AQ6ZMR3 332 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 SAMD7Q7Z3H4 446 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 PUS3Q9BZE2 481 aaKnown RBP12.08□□□□□ -0.48
LINC01090-201ENST00000415357 ANKRD2Q9GZV1 360 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 CNNM1Q9NRU3 951 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 LEMD3Q9Y2U8 911 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 PSME4Q14997 1843 aa12.08□□□□□ -0.48
LINC01090-201ENST00000415357 ZNF646O15015 1829 aaPredicted RBP12.07□□□□□ -0.48
LINC01090-201ENST00000415357 TRAF5O00463 557 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 EVI5O60447 810 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 BCAR3O75815 825 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 VIL1P09327 827 aaKnown RBP12.07□□□□□ -0.48
LINC01090-201ENST00000415357 RABL6Q3YEC7 729 aaPredicted RBP12.07□□□□□ -0.48
LINC01090-201ENST00000415357 TBC1D10BQ4KMP7 808 aaPredicted RBP12.07□□□□□ -0.48
LINC01090-201ENST00000415357 DPF2Q92785 391 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 FBXW7Q969H0 707 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 KLRG1Q96E93 195 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 MXD3Q9BW11 206 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 API5Q9BZZ5 524 aaKnown RBP12.07□□□□□ -0.48
LINC01090-201ENST00000415357 KIF16BQ96L93 1317 aa12.07□□□□□ -0.48
LINC01090-201ENST00000415357 H7C1D1 291 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 RPS12P25398 132 aaKnown RBP12.06□□□□□ -0.48
LINC01090-201ENST00000415357 EMP3P54852 163 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 RBM26Q5T8P6 1007 aaKnown RBP12.06□□□□□ -0.48
LINC01090-201ENST00000415357 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
LINC01090-201ENST00000415357 PODNQ7Z5L7 613 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 KLHDC4Q8TBB5 520 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 PCNTO95613 3336 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 ZBED9Q6R2W3 1325 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
LINC01090-201ENST00000415357 USP17L3A6NCW0 530 aa12.05□□□□□ -0.48
LINC01090-201ENST00000415357 USP17L4A6NCW7 530 aa12.05□□□□□ -0.48
LINC01090-201ENST00000415357 LRRC24Q50LG9 513 aa12.05□□□□□ -0.48
LINC01090-201ENST00000415357 USP17L1Q7RTZ2 530 aa12.05□□□□□ -0.48
LINC01090-201ENST00000415357 FRAT1Q92837 279 aaPredicted RBP12.05□□□□□ -0.48
LINC01090-201ENST00000415357 MEIS3Q99687 375 aa12.05□□□□□ -0.48
LINC01090-201ENST00000415357 GLIS2Q9BZE0 524 aaPredicted RBP12.05□□□□□ -0.48
LINC01090-201ENST00000415357 COA1Q9GZY4 146 aa12.05□□□□□ -0.48
LINC01090-201ENST00000415357 MKRN1Q9UHC7 482 aaKnown RBP12.05□□□□□ -0.48
LINC01090-201ENST00000415357 ARIH1Q9Y4X5 557 aaPredicted RBP12.05□□□□□ -0.48
LINC01090-201ENST00000415357 ZNF609O15014 1411 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 TMEM88BA6NKF7 163 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 TRIM27P14373 513 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 KIF4BQ2VIQ3 1234 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 DACT2Q5SW24 774 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 DLK2Q6UY11 383 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 GMLQ99445 158 aa12.04□□□□□ -0.48
LINC01090-201ENST00000415357 ASTN2O75129 1339 aaPredicted RBP12.04□□□□□ -0.48
LINC01090-201ENST00000415357 UBTFL1P0CB47 393 aaPredicted RBP12.03□□□□□ -0.48
LINC01090-201ENST00000415357 GTF2IP78347 998 aa12.03□□□□□ -0.48
LINC01090-201ENST00000415357 AGBL3Q8NEM8 1001 aa12.03□□□□□ -0.48
LINC01090-201ENST00000415357 CLUAP1Q96AJ1 413 aa12.03□□□□□ -0.48
LINC01090-201ENST00000415357 CD209Q9NNX6 404 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms