RNA–Protein interactions for RNA: ENST00000415143.1

SSR4P1-201, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

BASIC

Gene SSR4P1, Length 412 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-201ENST00000415143 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 ZSCAN23Q3MJ62 389 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 CCDC152Q4G0S7 254 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 LPIN2Q92539 896 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 APPBP2Q92624 585 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 GREM2Q9H772 168 aa15.96■□□□□ 0.15
SSR4P1-201ENST00000415143 HSPD1P10809 573 aaKnown RBP15.95■□□□□ 0.14
SSR4P1-201ENST00000415143 IGHMBP2P38935 993 aaKnown RBP15.95■□□□□ 0.14
SSR4P1-201ENST00000415143 MPHOSPH8Q99549 860 aa15.95■□□□□ 0.14
SSR4P1-201ENST00000415143 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 CYP21A2P08686 494 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 UBE2HP62256 183 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 HMGN5P82970 282 aaKnown RBP15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 CCDC129Q6ZRS4 1044 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 Q6ZUG5 572 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 FAM43AQ8N2R8 423 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 RTL9Q8NET4 1388 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 MAST3O60307 1309 aa15.94■□□□□ 0.14
SSR4P1-201ENST00000415143 NASPP49321 788 aaPredicted RBP15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 KRT85P78386 507 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 CCDC173Q0VFZ6 552 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 TOB2Q14106 344 aaPredicted RBP15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 LRSAM1Q6UWE0 723 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 USP48Q86UV5 1035 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 GPT2Q8TD30 523 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 TRIM44Q96DX7 344 aaPredicted RBP15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 CCDC85AQ96PX6 553 aaPredicted RBP15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 SEC62Q99442 399 aaKnown RBP15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 CDC5LQ99459 802 aaKnown RBP15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 MTMR6Q9Y217 621 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 NDUFB9Q9Y6M9 179 aa15.93■□□□□ 0.14
SSR4P1-201ENST00000415143 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 CAMTA2O94983 1202 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 LARGE1O95461 756 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 ARID4AP29374 1257 aaPredicted RBP15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 ADORA1P30542 326 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 FSTL1Q12841 308 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 UBE3CQ15386 1083 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 FBXL16Q8N461 479 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 FAM184AQ8NB25 1140 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 GTF3C6Q969F1 213 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 WDR19Q8NEZ3 1342 aa15.92■□□□□ 0.14
SSR4P1-201ENST00000415143 DHX16O60231 1041 aaKnown RBP15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 PFKFB2O60825 505 aa15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 ZAP70P43403 619 aa15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 SUSD4Q5VX71 490 aa15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 NECAB1Q8N987 351 aa15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 ZNF274Q96GC6 653 aaPredicted RBP15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 LARP6Q9BRS8 491 aaKnown RBP15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 SCAND2PQ9GZW5 306 aaPredicted RBP15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 ZSCAN16Q9H4T2 348 aaPredicted RBP15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 NIP7Q9Y221 180 aaKnown RBP eCLIP15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 RIC1Q4ADV7 1423 aa15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 NUP98P52948 1817 aa15.91■□□□□ 0.14
SSR4P1-201ENST00000415143 E7EWF7 191 aa15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 EXOSC10Q01780 885 aaKnown RBP15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 TRDNQ13061 729 aa15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 CCDC183Q5T5S1 534 aa15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 RALYLQ86SE5 291 aaKnown RBP15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 VGLL2Q8N8G2 317 aa15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 PCDH10Q9P2E7 1040 aa15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 UBN2Q6ZU65 1347 aa15.9■□□□□ 0.14
SSR4P1-201ENST00000415143 ZNF831Q5JPB2 1677 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 H3BQV1 296 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 M0R2C6 588 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 ZNF213O14771 459 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 MAP3K12Q12852 859 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 RC3H1Q5TC82 1133 aaKnown RBP15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 GAS2L3Q86XJ1 694 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 FLAD1Q8NFF5 587 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 NCOA7Q8NI08 942 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 AGXT2Q9BYV1 514 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 GNL3LQ9NVN8 582 aaKnown RBP15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 MYH3P11055 1940 aa15.89■□□□□ 0.13
SSR4P1-201ENST00000415143 FGFR2P21802 821 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 HMGB2P26583 209 aaKnown RBP15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 MCM5P33992 734 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 ADD2P35612 726 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 CCDC102BQ68D86 513 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 ATL3Q6DD88 541 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 SYNE4Q8N205 404 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 RGS22Q8NE09 1264 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 BRF1Q92994 677 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 NYXQ9GZU5 481 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 TSPY26PQ9H489 355 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 ELP1O95163 1332 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 CNTNAP4Q9C0A0 1308 aa15.88■□□□□ 0.13
SSR4P1-201ENST00000415143 GOLGA6L4A6NEF3 574 aa15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 GNAT2P19087 354 aa15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 STK3Q13188 491 aa15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 ITPK1Q13572 414 aa15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 SLC9C2Q5TAH2 1124 aa15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 NAA16Q6N069 864 aaPredicted RBP15.87■□□□□ 0.13
SSR4P1-201ENST00000415143 TMEM63CQ9P1W3 806 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms