RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 CD209Q9NNX6 404 aa16.02■□□□□ 0.16
CNOT4-204ENST00000414802 MYH2Q9UKX2 1941 aa16.02■□□□□ 0.15
CNOT4-204ENST00000414802 FBXW7Q969H0 707 aa16.02■□□□□ 0.15
CNOT4-204ENST00000414802 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.15
CNOT4-204ENST00000414802 AOX1Q06278 1338 aa16.01■□□□□ 0.15
CNOT4-204ENST00000414802 FRAT2O75474 233 aaPredicted RBP16.01■□□□□ 0.15
CNOT4-204ENST00000414802 UQCRFS1P1P0C7P4 283 aa16.01■□□□□ 0.15
CNOT4-204ENST00000414802 ATP5JP18859 108 aa16.01■□□□□ 0.15
CNOT4-204ENST00000414802 EDC3Q96F86 508 aaKnown RBP16.01■□□□□ 0.15
CNOT4-204ENST00000414802 COA1Q9GZY4 146 aa16.01■□□□□ 0.15
CNOT4-204ENST00000414802 GNL3LQ9NVN8 582 aaKnown RBP16.01■□□□□ 0.15
CNOT4-204ENST00000414802 HMG20BQ9P0W2 317 aa16.01■□□□□ 0.15
CNOT4-204ENST00000414802 YDJCA8MPS7 323 aa16■□□□□ 0.15
CNOT4-204ENST00000414802 ERC2O15083 957 aa16■□□□□ 0.15
CNOT4-204ENST00000414802 IL1R1P14778 569 aa16■□□□□ 0.15
CNOT4-204ENST00000414802 NIM1KQ8IY84 436 aa16■□□□□ 0.15
CNOT4-204ENST00000414802 TDRD7Q8NHU6 1098 aaKnown RBP16■□□□□ 0.15
CNOT4-204ENST00000414802 OSBPL3Q9H4L5 887 aa16■□□□□ 0.15
CNOT4-204ENST00000414802 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
CNOT4-204ENST00000414802 GLRX3O76003 335 aaKnown RBP15.99■□□□□ 0.15
CNOT4-204ENST00000414802 GSPT1P15170 499 aaKnown RBP15.99■□□□□ 0.15
CNOT4-204ENST00000414802 ZAP70P43403 619 aa15.99■□□□□ 0.15
CNOT4-204ENST00000414802 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
CNOT4-204ENST00000414802 LMNB1P20700 586 aa15.99■□□□□ 0.15
CNOT4-204ENST00000414802 SPATA5Q8NB90 893 aa15.99■□□□□ 0.15
CNOT4-204ENST00000414802 ZNF512BQ96KM6 892 aaPredicted RBP15.99■□□□□ 0.15
CNOT4-204ENST00000414802 GOLIM4O00461 696 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 GRIN3BO60391 1043 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 GTF2IP78347 998 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.98■□□□□ 0.15
CNOT4-204ENST00000414802 HAUS7Q99871 368 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 VPS33BQ9H267 617 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 ANTXR1Q9H6X2 564 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 RNF181Q9P0P0 153 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 DENND2AQ9ULE3 1009 aa15.98■□□□□ 0.15
CNOT4-204ENST00000414802 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
CNOT4-204ENST00000414802 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
CNOT4-204ENST00000414802 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
CNOT4-204ENST00000414802 SEMA3EO15041 775 aa15.96■□□□□ 0.15
CNOT4-204ENST00000414802 RAD17O75943 681 aa15.96■□□□□ 0.15
CNOT4-204ENST00000414802 CYP2E1P05181 493 aaPredicted RBP15.96■□□□□ 0.15
CNOT4-204ENST00000414802 C9orf131Q5VYM1 1079 aa15.96■□□□□ 0.15
CNOT4-204ENST00000414802 PODNQ7Z5L7 613 aa15.96■□□□□ 0.15
CNOT4-204ENST00000414802 PIH1D3Q9NQM4 214 aaKnown RBP15.96■□□□□ 0.15
CNOT4-204ENST00000414802 PAG1Q9NWQ8 432 aa15.96■□□□□ 0.15
CNOT4-204ENST00000414802 ZNRF3Q9ULT6 936 aa15.96■□□□□ 0.15
CNOT4-204ENST00000414802 TRIM6-TRIM34B2RNG4 842 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 FAM205AQ6ZU69 1335 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 ZNF541Q9H0D2 1346 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 CDK5RAP2Q96SN8 1893 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 GRIK5Q16478 980 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 RILPL2Q969X0 211 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 ABCF2Q9UG63 623 aa15.95■□□□□ 0.14
CNOT4-204ENST00000414802 PSMD14O00487 310 aa15.94■□□□□ 0.14
CNOT4-204ENST00000414802 TTLL5Q6EMB2 1281 aa15.94■□□□□ 0.14
CNOT4-204ENST00000414802 PDS5AQ29RF7 1337 aaKnown RBP15.94■□□□□ 0.14
CNOT4-204ENST00000414802 ECM29Q5VYK3 1845 aa15.94■□□□□ 0.14
CNOT4-204ENST00000414802 USP17L3A6NCW0 530 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 USP17L4A6NCW7 530 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 SDSP20132 328 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 CXCL9Q07325 125 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 MFSD14BQ5SR56 506 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 USP17L1Q7RTZ2 530 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 CERS5Q8N5B7 392 aa15.93■□□□□ 0.14
CNOT4-204ENST00000414802 PRDX5P30044 214 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 DACT2Q5SW24 774 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 WDR66Q8TBY9 1149 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 FSD1Q9BTV5 496 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 FZD9O00144 591 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 ZBTB22O15209 634 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 IDH1O75874 414 aaKnown RBP15.92■□□□□ 0.14
CNOT4-204ENST00000414802 CHGBP05060 677 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 EIF6P56537 245 aaKnown RBP15.92■□□□□ 0.14
CNOT4-204ENST00000414802 BMP2KLQ5H9B9 411 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 STRIP1Q5VSL9 837 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 CIAPIN1Q6FI81 312 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 CNTROBQ8N137 903 aa15.92■□□□□ 0.14
CNOT4-204ENST00000414802 SALL1Q9NSC2 1324 aa15.91■□□□□ 0.14
CNOT4-204ENST00000414802 F8W031 263 aaPredicted RBP15.91■□□□□ 0.14
CNOT4-204ENST00000414802 SLFNL1Q499Z3 407 aa15.91■□□□□ 0.14
CNOT4-204ENST00000414802 EVI5LQ96CN4 794 aa15.91■□□□□ 0.14
CNOT4-204ENST00000414802 RAI14Q9P0K7 980 aa15.91■□□□□ 0.14
CNOT4-204ENST00000414802 ZBTB12Q9Y330 459 aaPredicted RBP15.91■□□□□ 0.14
CNOT4-204ENST00000414802 GJA3Q9Y6H8 435 aa15.91■□□□□ 0.14
CNOT4-204ENST00000414802 DCAF8L1A6NGE4 600 aa15.9■□□□□ 0.14
CNOT4-204ENST00000414802 TTF1Q15361 905 aaPredicted RBP15.9■□□□□ 0.14
CNOT4-204ENST00000414802 KBTBD3Q8NAB2 608 aa15.9■□□□□ 0.14
CNOT4-204ENST00000414802 TBC1D22AQ8WUA7 517 aa15.9■□□□□ 0.14
CNOT4-204ENST00000414802 LRP2BPQ9P2M1 347 aa15.9■□□□□ 0.14
CNOT4-204ENST00000414802 LDHBP07195 334 aaKnown RBP15.89■□□□□ 0.13
CNOT4-204ENST00000414802 RSBN1LQ6PCB5 846 aaPredicted RBP15.89■□□□□ 0.13
CNOT4-204ENST00000414802 ERICH6Q7L0X2 663 aa15.89■□□□□ 0.13
CNOT4-204ENST00000414802 FOCADQ5VW36 1801 aa15.89■□□□□ 0.13
CNOT4-204ENST00000414802 VIL1P09327 827 aaKnown RBP15.89■□□□□ 0.13
CNOT4-204ENST00000414802 KIAA0825Q8IV33 1275 aa15.89■□□□□ 0.13
CNOT4-204ENST00000414802 ZGPATQ8N5A5 531 aaKnown RBP15.89■□□□□ 0.13
CNOT4-204ENST00000414802 ZNF384Q8TF68 577 aa15.89■□□□□ 0.13
CNOT4-204ENST00000414802 BAZ2AQ9UIF9 1905 aaKnown RBP15.88■□□□□ 0.13
CNOT4-204ENST00000414802 TNIP1Q15025 636 aa15.88■□□□□ 0.13
CNOT4-204ENST00000414802 DIXDC1Q155Q3 683 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 334.5 ms