RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PI4KAP2A4QPH2 592 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 NEURL1BA8MQ27 555 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 PPP1R12BO60237 982 aaPredicted RBP12.29□□□□□ -0.44
RFFL-203ENST00000413582 EN2P19622 333 aaPredicted RBP12.29□□□□□ -0.44
RFFL-203ENST00000413582 GNAI1P63096 354 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 MAPK8IP2Q13387 824 aaPredicted RBP12.29□□□□□ -0.44
RFFL-203ENST00000413582 DLGAP5Q15398 846 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
RFFL-203ENST00000413582 CCDC30Q5VVM6 783 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 KSR2Q6VAB6 950 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 UBE3BQ7Z3V4 1068 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 PI4KAP1Q8N8J0 262 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 PCDHAC2Q9Y5I4 1007 aa12.29□□□□□ -0.44
RFFL-203ENST00000413582 UNCXA6NJT0 531 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 ITGA6P23229 1130 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 CALD1Q05682 793 aaKnown RBP12.28□□□□□ -0.44
RFFL-203ENST00000413582 PLA2G12BQ9BX93 195 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 ANKRD2Q9GZV1 360 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 CD209Q9NNX6 404 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.28□□□□□ -0.44
RFFL-203ENST00000413582 AOX1Q06278 1338 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 ARAP2Q8WZ64 1704 aa12.28□□□□□ -0.44
RFFL-203ENST00000413582 CLRN2A0PK11 232 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 TESPA1A2RU30 521 aaPredicted RBP12.27□□□□□ -0.45
RFFL-203ENST00000413582 SPDYE2BA6NHP3 402 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 H7C1W4 665 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 SPDYE6P0CI01 402 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 CHRNDQ07001 517 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 NEXNQ0ZGT2 675 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 TSPYL6Q8N831 410 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 PTPN18Q99952 460 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 EFCC1Q9HA90 598 aa12.27□□□□□ -0.45
RFFL-203ENST00000413582 ZSWIM8A7E2V4 1837 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 SNAP23O00161 211 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 APAF1O14727 1248 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 KCNJ4P48050 445 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 IREB2P48200 963 aaKnown RBP12.26□□□□□ -0.45
RFFL-203ENST00000413582 CASP7P55210 303 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 SP3Q02447 781 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 CFAP100Q494V2 611 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 NBPF12Q5TAG4 269 aaPredicted RBP12.26□□□□□ -0.45
RFFL-203ENST00000413582 OTUD7BQ6GQQ9 843 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 C15orf52Q6ZUT6 534 aaKnown RBP12.26□□□□□ -0.45
RFFL-203ENST00000413582 ZNF333Q96JL9 665 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 MPHOSPH8Q99549 860 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 CHMP4AQ9BY43 222 aa12.26□□□□□ -0.45
RFFL-203ENST00000413582 F8W031 263 aaPredicted RBP12.25□□□□□ -0.45
RFFL-203ENST00000413582 MYO1BO43795 1136 aa12.25□□□□□ -0.45
RFFL-203ENST00000413582 USP2O75604 605 aaPredicted RBP12.25□□□□□ -0.45
RFFL-203ENST00000413582 GCKRQ14397 625 aa12.25□□□□□ -0.45
RFFL-203ENST00000413582 ANKRD13AQ8IZ07 590 aa12.25□□□□□ -0.45
RFFL-203ENST00000413582 PRMT6Q96LA8 375 aaPredicted RBP12.25□□□□□ -0.45
RFFL-203ENST00000413582 VEZTQ9HBM0 779 aa12.25□□□□□ -0.45
RFFL-203ENST00000413582 CACNA1FO60840 1977 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 CSF1RP07333 972 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 IL1R1P14778 569 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 FKBP1AP62942 108 aaKnown RBP12.24□□□□□ -0.45
RFFL-203ENST00000413582 RASA3Q14644 834 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 G2E3Q7L622 706 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 OPTNQ96CV9 577 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 MS4A4AQ96JQ5 239 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
RFFL-203ENST00000413582 PTCH2Q9Y6C5 1203 aa12.24□□□□□ -0.45
RFFL-203ENST00000413582 SZT2Q5T011 3432 aa12.23□□□□□ -0.45
RFFL-203ENST00000413582 BRI3BPQ8WY22 251 aa12.23□□□□□ -0.45
RFFL-203ENST00000413582 TMEM106CQ9BVX2 250 aa12.23□□□□□ -0.45
RFFL-203ENST00000413582 STK31Q9BXU1 1019 aa12.23□□□□□ -0.45
RFFL-203ENST00000413582 ELP3Q9H9T3 547 aa12.23□□□□□ -0.45
RFFL-203ENST00000413582 JAG2Q9Y219 1238 aa12.23□□□□□ -0.45
RFFL-203ENST00000413582 RANBP2P49792 3224 aaKnown RBP12.22□□□□□ -0.45
RFFL-203ENST00000413582 TAF5LO75529 589 aa12.22□□□□□ -0.45
RFFL-203ENST00000413582 SPDYE2Q495Y8 402 aa12.22□□□□□ -0.45
RFFL-203ENST00000413582 SLC9C1Q4G0N8 1177 aa12.22□□□□□ -0.45
RFFL-203ENST00000413582 ZNF804AQ7Z570 1209 aa12.22□□□□□ -0.45
RFFL-203ENST00000413582 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
RFFL-203ENST00000413582 HELBQ8NG08 1087 aaPredicted RBP12.22□□□□□ -0.45
RFFL-203ENST00000413582 TSR2Q969E8 191 aaKnown RBP12.22□□□□□ -0.45
RFFL-203ENST00000413582 ANKRD18BA2A2Z9 1011 aa12.21□□□□□ -0.45
RFFL-203ENST00000413582 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
RFFL-203ENST00000413582 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.21□□□□□ -0.45
RFFL-203ENST00000413582 TEPSINQ96N21 525 aa12.21□□□□□ -0.45
RFFL-203ENST00000413582 MYH16Q9H6N6 1097 aa12.21□□□□□ -0.45
RFFL-203ENST00000413582 FAM205AQ6ZU69 1335 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 CCL15-CCL14A0A0B4J2E2 113 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 RBM5P52756 815 aaKnown RBP eCLIP12.2□□□□□ -0.46
RFFL-203ENST00000413582 FLIIQ13045 1269 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 DDX10Q13206 875 aaKnown RBP12.2□□□□□ -0.46
RFFL-203ENST00000413582 TNFAIP1Q13829 316 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 VGLL4Q14135 290 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 CCL15Q16663 113 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 NBPF11Q86T75 865 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 FAM43AQ8N2R8 423 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 LINS1Q8NG48 757 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 DNAAF4Q8WXU2 420 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 OTUD5Q96G74 571 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 ZFYVE28Q9HCC9 887 aa12.2□□□□□ -0.46
RFFL-203ENST00000413582 ZNF70Q9UC06 446 aaPredicted RBP12.2□□□□□ -0.46
RFFL-203ENST00000413582 H0YGN5 161 aa12.19□□□□□ -0.46
RFFL-203ENST00000413582 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms