RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 HAUS7Q99871 368 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 COA1Q9GZY4 146 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 COL4A5P29400 1685 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 MAST2Q6P0Q8 1798 aa14.17□□□□□ -0.14
HDAC9-206ENST00000413380 GSPT1P15170 499 aaKnown RBP14.16□□□□□ -0.14
HDAC9-206ENST00000413380 MCAMP43121 646 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 GYG1P46976 350 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 RGS3P49796 1198 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 WASHC4Q2M389 1173 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 TTC39AQ5SRH9 613 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 GORABQ5T7V8 394 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 TSHZ3Q63HK5 1081 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 TICAM2Q86XR7 235 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 TDRD7Q8NHU6 1098 aaKnown RBP14.16□□□□□ -0.14
HDAC9-206ENST00000413380 TAOK3Q9H2K8 898 aa14.16□□□□□ -0.14
HDAC9-206ENST00000413380 GNL3LQ9NVN8 582 aaKnown RBP14.16□□□□□ -0.14
HDAC9-206ENST00000413380 RASGRF1Q13972 1273 aa14.15□□□□□ -0.14
HDAC9-206ENST00000413380 SCARF1Q14162 830 aa14.15□□□□□ -0.14
HDAC9-206ENST00000413380 GPR101Q96P66 508 aaPredicted RBP14.15□□□□□ -0.14
HDAC9-206ENST00000413380 ZC3H12CQ9C0D7 883 aaKnown RBP14.15□□□□□ -0.14
HDAC9-206ENST00000413380 CD209Q9NNX6 404 aa14.15□□□□□ -0.14
HDAC9-206ENST00000413380 RFX7Q2KHR2 1363 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 IGSF3O75054 1194 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 YBX3P16989 372 aaKnown RBP eCLIP14.14□□□□□ -0.15
HDAC9-206ENST00000413380 PODNQ7Z5L7 613 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 VPS37DQ86XT2 251 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 HMG20BQ9P0W2 317 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 DENND2AQ9ULE3 1009 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 FAM205AQ6ZU69 1335 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
HDAC9-206ENST00000413380 TIAM2Q8IVF5 1701 aa14.13□□□□□ -0.15
HDAC9-206ENST00000413380 IARSP41252 1262 aaKnown RBP14.13□□□□□ -0.15
HDAC9-206ENST00000413380 SPATA5Q8NB90 893 aa14.13□□□□□ -0.15
HDAC9-206ENST00000413380 BOLA2Q9H3K6 86 aa14.13□□□□□ -0.15
HDAC9-206ENST00000413380 PPIP5K2O43314 1243 aa14.12□□□□□ -0.15
HDAC9-206ENST00000413380 AOC3Q16853 763 aa14.12□□□□□ -0.15
HDAC9-206ENST00000413380 CHRDL2Q6WN34 429 aa14.12□□□□□ -0.15
HDAC9-206ENST00000413380 BCL11AQ9H165 835 aa14.12□□□□□ -0.15
HDAC9-206ENST00000413380 RIMBP2O15034 1052 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 CYP2E1P05181 493 aaPredicted RBP14.11□□□□□ -0.15
HDAC9-206ENST00000413380 SDSP20132 328 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 ZAP70P43403 619 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 PRELPP51888 382 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 EVI5LQ96CN4 794 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 ZNF277Q9NRM2 450 aaPredicted RBP14.11□□□□□ -0.15
HDAC9-206ENST00000413380 PAG1Q9NWQ8 432 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 WWC3Q9ULE0 1092 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 CLEC11AQ9Y240 323 aa14.11□□□□□ -0.15
HDAC9-206ENST00000413380 ECE2O60344 883 aa14.1□□□□□ -0.15
HDAC9-206ENST00000413380 FKBP1AP62942 108 aaKnown RBP14.1□□□□□ -0.15
HDAC9-206ENST00000413380 TTF1Q15361 905 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-206ENST00000413380 TMED8Q6PL24 325 aaPredicted RBP14.1□□□□□ -0.15
HDAC9-206ENST00000413380 PI16Q6UXB8 463 aa14.1□□□□□ -0.15
HDAC9-206ENST00000413380 CNTROBQ8N137 903 aa14.1□□□□□ -0.15
HDAC9-206ENST00000413380 LARGE2Q8N3Y3 721 aa14.1□□□□□ -0.15
HDAC9-206ENST00000413380 KBTBD3Q8NAB2 608 aa14.1□□□□□ -0.15
HDAC9-206ENST00000413380 WDR66Q8TBY9 1149 aa14.1□□□□□ -0.15
HDAC9-206ENST00000413380 MYH2Q9UKX2 1941 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 YDJCA8MPS7 323 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 GRIN3BO60391 1043 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 LMNB1P20700 586 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 RASSF7Q02833 373 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 STRIP1Q5VSL9 837 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 ZGPATQ8N5A5 531 aaKnown RBP14.09□□□□□ -0.15
HDAC9-206ENST00000413380 TBC1D22AQ8WUA7 517 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 SUGT1Q9Y2Z0 365 aa14.09□□□□□ -0.15
HDAC9-206ENST00000413380 GOLIM4O00461 696 aa14.08□□□□□ -0.16
HDAC9-206ENST00000413380 DOK7Q18PE1 504 aa14.08□□□□□ -0.16
HDAC9-206ENST00000413380 EDC3Q96F86 508 aaKnown RBP14.08□□□□□ -0.16
HDAC9-206ENST00000413380 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
HDAC9-206ENST00000413380 ANTXR1Q9H6X2 564 aa14.08□□□□□ -0.16
HDAC9-206ENST00000413380 DBNDD1Q9H9R9 158 aa14.08□□□□□ -0.16
HDAC9-206ENST00000413380 SNRKQ9NRH2 765 aa14.08□□□□□ -0.16
HDAC9-206ENST00000413380 ZNRF3Q9ULT6 936 aa14.08□□□□□ -0.16
HDAC9-206ENST00000413380 IQSEC3Q9UPP2 1182 aaPredicted RBP14.08□□□□□ -0.16
HDAC9-206ENST00000413380 FZD9O00144 591 aa14.07□□□□□ -0.16
HDAC9-206ENST00000413380 ARHGAP27Q6ZUM4 889 aa14.07□□□□□ -0.16
HDAC9-206ENST00000413380 NIM1KQ8IY84 436 aa14.07□□□□□ -0.16
HDAC9-206ENST00000413380 PIH1D3Q9NQM4 214 aaKnown RBP14.07□□□□□ -0.16
HDAC9-206ENST00000413380 NDUFB9Q9Y6M9 179 aa14.07□□□□□ -0.16
HDAC9-206ENST00000413380 USP17L3A6NCW0 530 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 USP17L4A6NCW7 530 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 TRIM6-TRIM34B2RNG4 842 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 FRAT2O75474 233 aaPredicted RBP14.06□□□□□ -0.16
HDAC9-206ENST00000413380 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
HDAC9-206ENST00000413380 ZFYP08048 801 aaPredicted RBP14.06□□□□□ -0.16
HDAC9-206ENST00000413380 DACT2Q5SW24 774 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 TTLL5Q6EMB2 1281 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 USP17L1Q7RTZ2 530 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 JDP2Q8WYK2 163 aa14.06□□□□□ -0.16
HDAC9-206ENST00000413380 ZC3H4Q9UPT8 1303 aaKnown RBP14.06□□□□□ -0.16
HDAC9-206ENST00000413380 G3V3G9 751 aa14.05□□□□□ -0.16
HDAC9-206ENST00000413380 HIP1O00291 1037 aa14.05□□□□□ -0.16
HDAC9-206ENST00000413380 VIL1P09327 827 aaKnown RBP14.05□□□□□ -0.16
HDAC9-206ENST00000413380 GTF2IP78347 998 aa14.05□□□□□ -0.16
HDAC9-206ENST00000413380 GPR162Q16538 588 aa14.05□□□□□ -0.16
HDAC9-206ENST00000413380 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
HDAC9-206ENST00000413380 DCAF8Q5TAQ9 597 aa14.05□□□□□ -0.16
HDAC9-206ENST00000413380 SPTY2D1Q68D10 685 aaPredicted RBP14.05□□□□□ -0.16
HDAC9-206ENST00000413380 MYO3BQ8WXR4 1341 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms