RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 FAM35AQ86V20 835 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 RASGRP4Q8TDF6 673 aa7.23□□□□□ -1.25
HMGB3P31-201ENST00000413333 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 PAGE1O75459 146 aa7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 SNAP47Q5SQN1 464 aa7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 GOLM1Q8NBJ4 401 aa7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 RHOVQ96L33 236 aa7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 HIRIP3Q9BW71 556 aaPredicted RBP7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 EFR3BQ9Y2G0 817 aa7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 SUPT16HQ9Y5B9 1047 aaKnown RBP7.22□□□□□ -1.25
HMGB3P31-201ENST00000413333 MX2P20592 715 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 LMNB2Q03252 620 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 CAMK2GQ13555 558 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 CCDC144BQ3MJ40 725 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 RPS26P11Q5JNZ5 115 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 ELMSAN1Q6PJG2 1045 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 BSNDQ8WZ55 320 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 PLD4Q96BZ4 506 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 IRX2Q9BZI1 471 aaPredicted RBP7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 LACRTQ9GZZ8 138 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 GINM1Q9NU53 330 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 TMEM39AQ9NV64 488 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 UBP1Q9NZI7 540 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 SLC6A14Q9UN76 642 aa7.21□□□□□ -1.26
HMGB3P31-201ENST00000413333 SIN3BO75182 1162 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 TFE3P19532 575 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 PPP2R3AQ06190 1150 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 RBL2Q08999 1139 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 AGMOQ6ZNB7 445 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 JARID2Q92833 1246 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 SEC16BQ96JE7 1060 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 SPATA32Q96LK8 384 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 NT5C1AQ9BXI3 368 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 SMG9Q9H0W8 520 aaKnown RBP7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 CLEC4MQ9H2X3 399 aaPredicted RBP7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 MRVI1Q9Y6F6 885 aa7.2□□□□□ -1.26
HMGB3P31-201ENST00000413333 FAM177BA6PVY3 158 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 PTPRAP18433 802 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 GARTP22102 1010 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 ADH7P40394 386 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 PCDH1Q08174 1060 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 APOBRQ0VD83 1088 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 PERM1Q5SV97 790 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 SOGA3Q5TF21 947 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 GIMAP6Q6P9H5 292 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 ADAMTSL4Q6UY14 1074 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 CPLX3Q8WVH0 158 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 NKD1Q969G9 470 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 ZSWIM4Q9H7M6 989 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 TRIM33Q9UPN9 1127 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 SAMM50Q9Y512 469 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 PCDHB5Q9Y5E4 795 aa7.19□□□□□ -1.26
HMGB3P31-201ENST00000413333 TLR3O15455 904 aaKnown RBP7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 GREM1O60565 184 aa7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 NFX1Q12986 1120 aaKnown RBP7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 GDF6Q6KF10 455 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 CKAP2LQ8IYA6 745 aa7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 NANOS1Q8WY41 292 aaKnown RBP7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 TNFRSF25Q93038 417 aa7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 CBX8Q9HC52 389 aa7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 SH2B1Q9NRF2 756 aaPredicted RBP7.18□□□□□ -1.26
HMGB3P31-201ENST00000413333 NEURL1BA8MQ27 555 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 ADH6P28332 368 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 RPS26P62854 115 aaKnown RBP7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 ZNF423Q2M1K9 1284 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 BNC2Q6ZN30 1099 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 LPIN3Q9BQK8 851 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 MIR1-1HGQ9H1L0 117 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 ZNF408Q9H9D4 720 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 AVENQ9NQS1 362 aaPredicted RBP7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 KCNQ5Q9NR82 932 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 KLF15Q9UIH9 416 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 NAGPAQ9UK23 515 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 SOX13Q9UN79 622 aa7.17□□□□□ -1.26
HMGB3P31-201ENST00000413333 F13A1P00488 732 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 BMP6P22004 513 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 NME2P22392 152 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 CDC25BP30305 580 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 MCM4P33991 863 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 ETFBP38117 255 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 CRKP46108 304 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 SEPT6Q14141 434 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 SEZ6Q53EL9 994 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 RASIP1Q5U651 963 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 PSAPL1Q6NUJ1 521 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 Q6ZNB5 142 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 FAM196AQ6ZSG2 479 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 VN1R5Q7Z5H4 357 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 TRIM42Q8IWZ5 723 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 FBXO27Q8NI29 283 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 NUDT8Q8WV74 236 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 OSBPL2Q9H1P3 480 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 PIF1Q9H611 641 aa7.16□□□□□ -1.26
HMGB3P31-201ENST00000413333 B3GALT4O96024 378 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 ARAFP10398 606 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 CDC27P30260 824 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 CABP4P57796 275 aa7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 COL9A2Q14055 689 aaPredicted RBP7.15□□□□□ -1.26
HMGB3P31-201ENST00000413333 IKBKEQ14164 716 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms