RNA–Protein interactions for RNA: ENST00000413023.1

HMGN1P34-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 34, humanhuman

BASIC

Gene HMGN1P34, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P34-201ENST00000413023 CYP46A1Q9Y6A2 500 aa10.34□□□□□ -0.75
HMGN1P34-201ENST00000413023 TACC3Q9Y6A5 838 aa10.34□□□□□ -0.75
HMGN1P34-201ENST00000413023 AKAP11Q9UKA4 1901 aa10.34□□□□□ -0.75
HMGN1P34-201ENST00000413023 TNRC6CQ9HCJ0 1690 aaKnown RBP10.34□□□□□ -0.75
HMGN1P34-201ENST00000413023 IDH1O75874 414 aaKnown RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 FGAP02671 866 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 ZFYP08048 801 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 RPS6KB1P23443 525 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 GPSM2P81274 684 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 TTF1Q15361 905 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 ADGRA1Q86SQ6 560 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 ZNF384Q8TF68 577 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 TNPO1Q92973 898 aaKnown RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 GPR101Q96P66 508 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 STRBPQ96SI9 672 aaKnown RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 NBPF3Q9H094 633 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 ANO8Q9HCE9 1232 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 TPCN1Q9ULQ1 816 aa10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 CIZ1Q9ULV3 898 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 COL1A1P02452 1464 aaPredicted RBP10.33□□□□□ -0.76
HMGN1P34-201ENST00000413023 GPAA1O43292 621 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 PRKAB2O43741 272 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 ZKSCAN1P17029 563 aaPredicted RBP10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 MCM2P49736 904 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 ME3Q16798 604 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 MAGEB6Q8N7X4 407 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 CHAMP1Q96JM3 812 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 NEK1Q96PY6 1258 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 ANKRD2Q9GZV1 360 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 RNF216Q9NWF9 866 aaPredicted RBP10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 DENND2AQ9ULE3 1009 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 LIMCH1Q9UPQ0 1083 aa10.32□□□□□ -0.76
HMGN1P34-201ENST00000413023 E7EWF7 191 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 MSL1Q68DK7 614 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 NLGN1Q8N2Q7 840 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 NECAB1Q8N987 351 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 PDGFDQ9GZP0 370 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 ARMT1Q9H993 441 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 CWC22Q9HCG8 908 aaKnown RBP10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 INCENPQ9NQS7 918 aa10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 GPHNQ9NQX3 736 aaPredicted RBP10.31□□□□□ -0.76
HMGN1P34-201ENST00000413023 GSG1L2A8MUP6 293 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 SMIM22K7EJ46 135 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 NPHP1O15259 732 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 HSP90AA1P07900 732 aaKnown RBP10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 MMP10P09238 476 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 PSMA5P28066 241 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 HIBADHP31937 336 aaKnown RBP10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 MCM4P33991 863 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 HAND2P61296 217 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 GRIK5Q16478 980 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 RNF20Q5VTR2 975 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 ZSCAN25Q6NSZ9 544 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 OLFM4Q6UX06 510 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 INTS4Q96HW7 963 aaKnown RBP10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 CRAMP1Q96RY5 1269 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 LRRC2Q9BYS8 371 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
HMGN1P34-201ENST00000413023 PATL2C9JE40 543 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 BBOX1O75936 387 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 MBD4O95243 580 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 DYNLL1P63167 89 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 ST5P78524 1137 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 MAP3K12Q12852 859 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 SLC15A2Q16348 729 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 LRRFIP1Q32MZ4 808 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 CAVIN4Q5BKX8 364 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 CLEC17AQ6ZS10 378 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 Q6ZUG5 572 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 C15orf52Q6ZUT6 534 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 CHST3Q7LGC8 479 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 DEFB132Q7Z7B7 95 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 LCORLQ8N3X6 602 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 IL27Q8NEV9 243 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 TDRD7Q8NHU6 1098 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 RPGRQ92834 1020 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 RBM17Q96I25 401 aaKnown RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 EPB41L4AQ9HCS5 686 aaPredicted RBP10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 LRP2BPQ9P2M1 347 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 POLLQ9UGP5 575 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 JAG2Q9Y219 1238 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 LEMD3Q9Y2U8 911 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 ARAP2Q8WZ64 1704 aa10.29□□□□□ -0.76
HMGN1P34-201ENST00000413023 ZBTB22O15209 634 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 SRGNP10124 158 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 CYP7A1P22680 504 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 ANTXR2P58335 489 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 KRT32Q14532 448 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 ALX1Q15699 326 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 DHX32Q7L7V1 743 aaKnown RBP10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 TBC1D10CQ8IV04 446 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 CCDC83Q8IWF9 413 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 MIGA1Q8NAN2 632 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 FLAD1Q8NFF5 587 aa10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 ZSCAN31Q96LW9 406 aaPredicted RBP10.28□□□□□ -0.76
HMGN1P34-201ENST00000413023 RIOK1Q9BRS2 568 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms