RNA–Protein interactions for RNA: ENST00000411836.1

LSM12P1-201, Transcript of LSM12 pseudogene 1, humanhuman

BASIC

Gene LSM12P1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12P1-201ENST00000411836 MMP14P50281 582 aa25.3■■□□□ 1.64
LSM12P1-201ENST00000411836 HTRA3P83110 453 aa25.3■■□□□ 1.64
LSM12P1-201ENST00000411836 CHAF1AQ13111 956 aaPredicted RBP25.3■■□□□ 1.64
LSM12P1-201ENST00000411836 PGAP2Q9UHJ9 254 aa25.3■■□□□ 1.64
LSM12P1-201ENST00000411836 AKAP2Q9Y2D5 859 aa25.3■■□□□ 1.64
LSM12P1-201ENST00000411836 F8W031 263 aaPredicted RBP25.29■■□□□ 1.64
LSM12P1-201ENST00000411836 TFCP2Q12800 502 aa25.29■■□□□ 1.64
LSM12P1-201ENST00000411836 CDC37L1Q7L3B6 337 aa25.29■■□□□ 1.64
LSM12P1-201ENST00000411836 PASKQ96RG2 1323 aa25.29■■□□□ 1.64
LSM12P1-201ENST00000411836 FKBP1AP62942 108 aaKnown RBP25.28■■□□□ 1.64
LSM12P1-201ENST00000411836 SCARF1Q14162 830 aa25.28■■□□□ 1.64
LSM12P1-201ENST00000411836 SSH3Q8TE77 659 aa25.28■■□□□ 1.64
LSM12P1-201ENST00000411836 GLIS2Q9BZE0 524 aaPredicted RBP25.28■■□□□ 1.64
LSM12P1-201ENST00000411836 GNL3LQ9NVN8 582 aaKnown RBP25.28■■□□□ 1.64
LSM12P1-201ENST00000411836 FAM205AQ6ZU69 1335 aa25.28■■□□□ 1.64
LSM12P1-201ENST00000411836 SURF6O75683 361 aaKnown RBP25.27■■□□□ 1.64
LSM12P1-201ENST00000411836 POLA2Q14181 598 aa25.27■■□□□ 1.64
LSM12P1-201ENST00000411836 MFSD14BQ5SR56 506 aa25.27■■□□□ 1.64
LSM12P1-201ENST00000411836 TMEM88BA6NKF7 163 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 TRAF5O00463 557 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 C20orf194Q5TEA3 1177 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 CEP85Q6P2H3 762 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 KRT26Q7Z3Y9 468 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 USP48Q86UV5 1035 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 CERS5Q8N5B7 392 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 NEUROD6Q96NK8 337 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 CREBZFQ9NS37 354 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 GGA3Q9NZ52 723 aa25.26■■□□□ 1.63
LSM12P1-201ENST00000411836 TIMM10P62072 90 aa25.25■■□□□ 1.63
LSM12P1-201ENST00000411836 SULF1Q8IWU6 871 aa25.25■■□□□ 1.63
LSM12P1-201ENST00000411836 TBC1D22AQ8WUA7 517 aa25.25■■□□□ 1.63
LSM12P1-201ENST00000411836 DLGAP5Q15398 846 aa25.24■■□□□ 1.63
LSM12P1-201ENST00000411836 ANGEL2Q5VTE6 544 aaKnown RBP25.24■■□□□ 1.63
LSM12P1-201ENST00000411836 A0A1B0GUL7 405 aa25.23■■□□□ 1.63
LSM12P1-201ENST00000411836 RBM5P52756 815 aaKnown RBP eCLIP25.23■■□□□ 1.63
LSM12P1-201ENST00000411836 GORABQ5T7V8 394 aa25.23■■□□□ 1.63
LSM12P1-201ENST00000411836 ZNF408Q9H9D4 720 aa25.23■■□□□ 1.63
LSM12P1-201ENST00000411836 ZBTB40Q9NUA8 1239 aa25.23■■□□□ 1.63
LSM12P1-201ENST00000411836 ASTN2O75129 1339 aaPredicted RBP25.22■■□□□ 1.63
LSM12P1-201ENST00000411836 ADORA1P30542 326 aa25.22■■□□□ 1.63
LSM12P1-201ENST00000411836 FMR1Q06787 632 aaKnown RBP eCLIP25.22■■□□□ 1.63
LSM12P1-201ENST00000411836 NBPF9Q3BBW0 867 aa25.22■■□□□ 1.63
LSM12P1-201ENST00000411836 TTF2Q9UNY4 1162 aaKnown RBP25.22■■□□□ 1.63
LSM12P1-201ENST00000411836 WNT10BO00744 389 aa25.21■■□□□ 1.63
LSM12P1-201ENST00000411836 HMMRO75330 724 aa25.21■■□□□ 1.63
LSM12P1-201ENST00000411836 CELF2O95319 508 aaKnown RBP25.21■■□□□ 1.63
LSM12P1-201ENST00000411836 RPAP2Q8IXW5 612 aaPredicted RBP25.21■■□□□ 1.63
LSM12P1-201ENST00000411836 XAGE2Q96GT9 111 aa25.21■■□□□ 1.63
LSM12P1-201ENST00000411836 ABT1Q9ULW3 272 aaKnown RBP25.21■■□□□ 1.63
LSM12P1-201ENST00000411836 ADM5C9JUS6 153 aa25.2■■□□□ 1.62
LSM12P1-201ENST00000411836 PHKA1P46020 1223 aa25.2■■□□□ 1.62
LSM12P1-201ENST00000411836 CFAP100Q494V2 611 aa25.2■■□□□ 1.62
LSM12P1-201ENST00000411836 WDR66Q8TBY9 1149 aa25.2■■□□□ 1.62
LSM12P1-201ENST00000411836 NOP58Q9Y2X3 529 aaKnown RBP25.2■■□□□ 1.62
LSM12P1-201ENST00000411836 MYO1BO43795 1136 aa25.19■■□□□ 1.62
LSM12P1-201ENST00000411836 RRP1P56182 461 aaKnown RBP25.19■■□□□ 1.62
LSM12P1-201ENST00000411836 CCDC102BQ68D86 513 aa25.19■■□□□ 1.62
LSM12P1-201ENST00000411836 DENND2AQ9ULE3 1009 aa25.19■■□□□ 1.62
LSM12P1-201ENST00000411836 PITPNM2Q9BZ72 1349 aa25.18■■□□□ 1.62
LSM12P1-201ENST00000411836 SEMA3EO15041 775 aa25.18■■□□□ 1.62
LSM12P1-201ENST00000411836 DNAJC5GQ8N7S2 189 aa25.18■■□□□ 1.62
LSM12P1-201ENST00000411836 MKRN1Q9UHC7 482 aaKnown RBP25.18■■□□□ 1.62
LSM12P1-201ENST00000411836 ZNF646O15015 1829 aaPredicted RBP25.18■■□□□ 1.62
LSM12P1-201ENST00000411836 HSP90AB4PQ58FF6 505 aa25.17■■□□□ 1.62
LSM12P1-201ENST00000411836 ERC1Q8IUD2 1116 aa25.17■■□□□ 1.62
LSM12P1-201ENST00000411836 KLRG1Q96E93 195 aa25.17■■□□□ 1.62
LSM12P1-201ENST00000411836 CST9Q5W186 159 aa25.16■■□□□ 1.62
LSM12P1-201ENST00000411836 MTMR14Q8NCE2 650 aa25.16■■□□□ 1.62
LSM12P1-201ENST00000411836 GPR108Q9NPR9 543 aa25.16■■□□□ 1.62
LSM12P1-201ENST00000411836 EXOC6BQ9Y2D4 811 aa25.16■■□□□ 1.62
LSM12P1-201ENST00000411836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.16■■□□□ 1.62
LSM12P1-201ENST00000411836 TNNI3KQ59H18 835 aa25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 DLK2Q6UY11 383 aa25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 APOBEC3FQ8IUX4 373 aaKnown RBP25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 SERPINA10Q9UK55 444 aa25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 SCAF8Q9UPN6 1271 aaKnown RBP25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 SUGT1Q9Y2Z0 365 aa25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 FPGT-TNNI3KV9GXZ4 949 aa25.15■■□□□ 1.62
LSM12P1-201ENST00000411836 MAST3O60307 1309 aa25.14■■□□□ 1.62
LSM12P1-201ENST00000411836 SPDYE2BA6NHP3 402 aa25.14■■□□□ 1.62
LSM12P1-201ENST00000411836 SPDYE6P0CI01 402 aa25.14■■□□□ 1.62
LSM12P1-201ENST00000411836 PAXIP1Q6ZW49 1069 aaPredicted RBP25.14■■□□□ 1.62
LSM12P1-201ENST00000411836 CRKP46108 304 aa25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 GRIK5Q16478 980 aa25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 DEFB115Q30KQ5 88 aa25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 TEKT1Q969V4 418 aa25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 CDCA5Q96FF9 252 aa25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 ZBED3Q96IU2 234 aaPredicted RBP25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 PRMT6Q96LA8 375 aaPredicted RBP25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 PCDHAC2Q9Y5I4 1007 aa25.13■■□□□ 1.61
LSM12P1-201ENST00000411836 CLRN2A0PK11 232 aa25.12■■□□□ 1.61
LSM12P1-201ENST00000411836 CCDC158Q5M9N0 1113 aa25.12■■□□□ 1.61
LSM12P1-201ENST00000411836 ZGPATQ8N5A5 531 aaKnown RBP25.12■■□□□ 1.61
LSM12P1-201ENST00000411836 C2orf69Q8N8R5 385 aa25.12■■□□□ 1.61
LSM12P1-201ENST00000411836 VEZTQ9HBM0 779 aa25.12■■□□□ 1.61
LSM12P1-201ENST00000411836 APBB1O00213 710 aa25.11■■□□□ 1.61
LSM12P1-201ENST00000411836 LDHBP07195 334 aaKnown RBP25.11■■□□□ 1.61
LSM12P1-201ENST00000411836 UQCRFS1P1P0C7P4 283 aa25.11■■□□□ 1.61
LSM12P1-201ENST00000411836 HDLBPQ00341 1268 aaKnown RBP25.11■■□□□ 1.61
LSM12P1-201ENST00000411836 RASGRF1Q13972 1273 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms