RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 CRBNQ96SW2 442 aa14.84□□□□□ -0.03
NEDD1-202ENST00000411739 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
NEDD1-202ENST00000411739 ASTN2O75129 1339 aaPredicted RBP14.83□□□□□ -0.04
NEDD1-202ENST00000411739 RPS12P25398 132 aaKnown RBP14.83□□□□□ -0.04
NEDD1-202ENST00000411739 DLK2Q6UY11 383 aa14.83□□□□□ -0.04
NEDD1-202ENST00000411739 USP17L8P0C7I0 530 aa14.83□□□□□ -0.04
NEDD1-202ENST00000411739 USP50Q70EL3 339 aaPredicted RBP14.83□□□□□ -0.04
NEDD1-202ENST00000411739 AGBL3Q8NEM8 1001 aa14.83□□□□□ -0.04
NEDD1-202ENST00000411739 SCAF8Q9UPN6 1271 aaKnown RBP14.83□□□□□ -0.04
NEDD1-202ENST00000411739 A0A1B0GUL7 405 aa14.82□□□□□ -0.04
NEDD1-202ENST00000411739 PHKA1P46020 1223 aa14.82□□□□□ -0.04
NEDD1-202ENST00000411739 GRIK5Q16478 980 aa14.82□□□□□ -0.04
NEDD1-202ENST00000411739 CNTROBQ8N137 903 aa14.82□□□□□ -0.04
NEDD1-202ENST00000411739 PCDHAC2Q9Y5I4 1007 aa14.82□□□□□ -0.04
NEDD1-202ENST00000411739 FSTL1Q12841 308 aa14.81□□□□□ -0.04
NEDD1-202ENST00000411739 KIF4BQ2VIQ3 1234 aa14.81□□□□□ -0.04
NEDD1-202ENST00000411739 XAGE2Q96GT9 111 aa14.81□□□□□ -0.04
NEDD1-202ENST00000411739 TRAF5O00463 557 aa14.8□□□□□ -0.04
NEDD1-202ENST00000411739 MFSD14BQ5SR56 506 aa14.8□□□□□ -0.04
NEDD1-202ENST00000411739 RPAP2Q8IXW5 612 aaPredicted RBP14.8□□□□□ -0.04
NEDD1-202ENST00000411739 MYOZ2Q9NPC6 264 aa14.8□□□□□ -0.04
NEDD1-202ENST00000411739 NOP58Q9Y2X3 529 aaKnown RBP14.8□□□□□ -0.04
NEDD1-202ENST00000411739 PSME4Q14997 1843 aa14.8□□□□□ -0.04
NEDD1-202ENST00000411739 ZNF280AP59817 542 aaPredicted RBP14.8□□□□□ -0.04
NEDD1-202ENST00000411739 GLIS2Q9BZE0 524 aaPredicted RBP14.8□□□□□ -0.04
NEDD1-202ENST00000411739 ZNF646O15015 1829 aaPredicted RBP14.79□□□□□ -0.04
NEDD1-202ENST00000411739 ITGBL1O95965 494 aaPredicted RBP14.79□□□□□ -0.04
NEDD1-202ENST00000411739 HSPA6P17066 643 aa14.79□□□□□ -0.04
NEDD1-202ENST00000411739 IRX6P78412 446 aaPredicted RBP14.79□□□□□ -0.04
NEDD1-202ENST00000411739 NBPF9Q3BBW0 867 aa14.79□□□□□ -0.04
NEDD1-202ENST00000411739 CCDC102BQ68D86 513 aa14.79□□□□□ -0.04
NEDD1-202ENST00000411739 OGFOD1Q8N543 542 aa14.79□□□□□ -0.04
NEDD1-202ENST00000411739 CHMP4BQ9H444 224 aaKnown RBP14.79□□□□□ -0.04
NEDD1-202ENST00000411739 AKAP2Q9Y2D5 859 aa14.79□□□□□ -0.04
NEDD1-202ENST00000411739 FAM205AQ6ZU69 1335 aa14.79□□□□□ -0.04
NEDD1-202ENST00000411739 SCARF1Q14162 830 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 CCDC8Q9H0W5 538 aaPredicted RBP14.78□□□□□ -0.04
NEDD1-202ENST00000411739 IL1RAPL2Q9NP60 686 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 TNNI3KQ59H18 835 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 GORABQ5T7V8 394 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 PCDHB15Q9Y5E8 787 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 FPGT-TNNI3KV9GXZ4 949 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 ADAMTSL1Q8N6G6 1762 aa14.78□□□□□ -0.04
NEDD1-202ENST00000411739 USP48Q86UV5 1035 aa14.77□□□□□ -0.04
NEDD1-202ENST00000411739 DBNDD2Q9BQY9 259 aa14.77□□□□□ -0.04
NEDD1-202ENST00000411739 TLR7Q9NYK1 1049 aaKnown RBP14.77□□□□□ -0.04
NEDD1-202ENST00000411739 MYO3BQ8WXR4 1341 aa14.77□□□□□ -0.04
NEDD1-202ENST00000411739 COL1A1P02452 1464 aaPredicted RBP14.77□□□□□ -0.04
NEDD1-202ENST00000411739 TTF2Q9UNY4 1162 aaKnown RBP14.77□□□□□ -0.05
NEDD1-202ENST00000411739 AOX1Q06278 1338 aa14.77□□□□□ -0.05
NEDD1-202ENST00000411739 HMMRO75330 724 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 RBM5P52756 815 aaKnown RBP eCLIP14.76□□□□□ -0.05
NEDD1-202ENST00000411739 ANGEL2Q5VTE6 544 aaKnown RBP14.76□□□□□ -0.05
NEDD1-202ENST00000411739 PI16Q6UXB8 463 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
NEDD1-202ENST00000411739 GGA3Q9NZ52 723 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 ZNF609O15014 1411 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 CEP350Q5VT06 3117 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 ADM5C9JUS6 153 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 GNL3LQ9NVN8 582 aaKnown RBP14.76□□□□□ -0.05
NEDD1-202ENST00000411739 HDAC9Q9UKV0 1011 aa14.76□□□□□ -0.05
NEDD1-202ENST00000411739 WNT10BO00744 389 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 RASGRF1Q13972 1273 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 EXOC6Q8TAG9 804 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 RHPN1Q8TCX5 695 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 CFAP100Q494V2 611 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 ZNF408Q9H9D4 720 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 SNRKQ9NRH2 765 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 PGAP2Q9UHJ9 254 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 PASKQ96RG2 1323 aa14.75□□□□□ -0.05
NEDD1-202ENST00000411739 APLP1P51693 650 aa14.74□□□□□ -0.05
NEDD1-202ENST00000411739 PRAMEF18Q5VWM3 479 aa14.74□□□□□ -0.05
NEDD1-202ENST00000411739 KRT26Q7Z3Y9 468 aa14.74□□□□□ -0.05
NEDD1-202ENST00000411739 AACSQ86V21 672 aa14.74□□□□□ -0.05
NEDD1-202ENST00000411739 DCPSQ96C86 337 aaKnown RBP14.74□□□□□ -0.05
NEDD1-202ENST00000411739 PRMT6Q96LA8 375 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-202ENST00000411739 POLR2AP24928 1970 aaKnown RBP14.74□□□□□ -0.05
NEDD1-202ENST00000411739 SMARCA5O60264 1052 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-202ENST00000411739 DLGAP5Q15398 846 aa14.74□□□□□ -0.05
NEDD1-202ENST00000411739 ZC3H15Q8WU90 426 aaKnown RBP14.74□□□□□ -0.05
NEDD1-202ENST00000411739 DBNLQ9UJU6 430 aaKnown RBP14.74□□□□□ -0.05
NEDD1-202ENST00000411739 CLRN2A0PK11 232 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 PRDX5P30044 214 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 FKBP1AP62942 108 aaKnown RBP14.73□□□□□ -0.05
NEDD1-202ENST00000411739 TBC1D9Q6ZT07 1266 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 CDC37L1Q7L3B6 337 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 GPR108Q9NPR9 543 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 HMG20BQ9P0W2 317 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 ABCF2Q9UG63 623 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 DENND2AQ9ULE3 1009 aa14.73□□□□□ -0.05
NEDD1-202ENST00000411739 TTC39AQ5SRH9 613 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 ERC1Q8IUD2 1116 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 WDR66Q8TBY9 1149 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 TBC1D22AQ8WUA7 517 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 NDUFB9Q9Y6M9 179 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 MCAMP43121 646 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 CRKP46108 304 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 DIXDC1Q155Q3 683 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 HSP90AB4PQ58FF6 505 aa14.72□□□□□ -0.05
NEDD1-202ENST00000411739 ZBED3Q96IU2 234 aaPredicted RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms