RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
LINC00396-201ENST00000411690 RBBP6Q7Z6E9 1792 aaKnown RBP8.55□□□□□ -1.04
LINC00396-201ENST00000411690 ERVV-1B6SEH8 477 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 TLL1O43897 1013 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 BBOX1O75936 387 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 ALDH1A1P00352 501 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 GPTP24298 496 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 ANGEL2Q5VTE6 544 aaKnown RBP8.54□□□□□ -1.04
LINC00396-201ENST00000411690 SUSD4Q5VX71 490 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 MOB2Q70IA6 237 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 ARMC5Q96C12 935 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 ABCC4O15439 1325 aa8.54□□□□□ -1.04
LINC00396-201ENST00000411690 ASTN2O75129 1339 aaPredicted RBP8.54□□□□□ -1.04
LINC00396-201ENST00000411690 IBTKQ9P2D0 1353 aaPredicted RBP8.53□□□□□ -1.04
LINC00396-201ENST00000411690 TTLL12Q14166 644 aaPredicted RBP8.53□□□□□ -1.04
LINC00396-201ENST00000411690 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 SPRYD7Q5W111 196 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 GAS2L2Q8NHY3 880 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 ERO1AQ96HE7 468 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 DBNDD1Q9H9R9 158 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 UBN2Q6ZU65 1347 aa8.53□□□□□ -1.04
LINC00396-201ENST00000411690 SPDYE16A6NNV3 312 aaPredicted RBP8.52□□□□□ -1.05
LINC00396-201ENST00000411690 DGAT1O75907 488 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 NTSR2O95665 410 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 TCIRG1Q13488 830 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 SCARF1Q14162 830 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 SLC4A8Q2Y0W8 1093 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 BLOC1S3Q6QNY0 202 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 PPP1R42Q7Z4L9 355 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 PANK3Q9H999 370 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 SIPA1L3O60292 1781 aaPredicted RBP8.52□□□□□ -1.05
LINC00396-201ENST00000411690 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.05
LINC00396-201ENST00000411690 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 DIAPH1O60610 1272 aaKnown RBP8.51□□□□□ -1.05
LINC00396-201ENST00000411690 OSBPP22059 807 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 PRR20EP86478 221 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 PRR20CP86479 221 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 PRR20DP86480 221 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 PRR20BP86481 221 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 PRR20AP86496 221 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 PADI6Q6TGC4 694 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 KIF6Q6ZMV9 814 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 NBPF11Q86T75 865 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 TTC13Q8NBP0 860 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 CD99L2Q8TCZ2 262 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 DPF3Q92784 378 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 ZNF333Q96JL9 665 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 COL25A1Q9BXS0 654 aaPredicted RBP8.51□□□□□ -1.05
LINC00396-201ENST00000411690 EFCC1Q9HA90 598 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 KCNQ5Q9NR82 932 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 TRIOBPQ9H2D6 2365 aa8.51□□□□□ -1.05
LINC00396-201ENST00000411690 CEMIPQ8WUJ3 1361 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 MKI67P46013 3256 aaKnown RBP8.5□□□□□ -1.05
LINC00396-201ENST00000411690 TNFRSF10AO00220 468 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 ECE2O60344 883 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 NF2P35240 595 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 INHBEP58166 350 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 SLC10A5Q5PT55 438 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 PRAMEF18Q5VWM3 479 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 DDX46Q7L014 1031 aaKnown RBP8.5□□□□□ -1.05
LINC00396-201ENST00000411690 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
LINC00396-201ENST00000411690 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 ZNF34Q8IZ26 560 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 ZBTB3Q9H5J0 574 aa8.5□□□□□ -1.05
LINC00396-201ENST00000411690 RTL9Q8NET4 1388 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 KIAA0100Q14667 2235 aaKnown RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 FAM187AA6NFU0 413 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 MANSC4A6NHS7 340 aaPredicted RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 C6orf229H3BNL8 230 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 PTPN12Q05209 780 aaKnown RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 GRAPQ13588 217 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 SLC9C1Q4G0N8 1177 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 PARP10Q53GL7 1025 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 TREML4Q6UXN2 200 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 TTLL7Q6ZT98 887 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 TMC4Q7Z404 712 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 GRAPLQ8TC17 118 aaPredicted RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 NECTIN2Q92692 538 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 NSFL1CQ9UNZ2 370 aaKnown RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 SCAF8Q9UPN6 1271 aaKnown RBP8.49□□□□□ -1.05
LINC00396-201ENST00000411690 PCDHB3Q9Y5E6 796 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 NUP98P52948 1817 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 SZT2Q5T011 3432 aa8.49□□□□□ -1.05
LINC00396-201ENST00000411690 WTIPA6NIX2 430 aaPredicted RBP8.48□□□□□ -1.05
LINC00396-201ENST00000411690 MYCP01106 439 aaPredicted RBP8.48□□□□□ -1.05
LINC00396-201ENST00000411690 ZNF280AP59817 542 aaPredicted RBP8.48□□□□□ -1.05
LINC00396-201ENST00000411690 SP3Q02447 781 aa8.48□□□□□ -1.05
LINC00396-201ENST00000411690 ZNF697Q5TEC3 545 aa8.48□□□□□ -1.05
LINC00396-201ENST00000411690 ARMC9Q7Z3E5 817 aa8.48□□□□□ -1.05
LINC00396-201ENST00000411690 EYA3Q99504 573 aa8.48□□□□□ -1.05
LINC00396-201ENST00000411690 UTP14AQ9BVJ6 771 aaKnown RBP8.48□□□□□ -1.05
LINC00396-201ENST00000411690 PRO3102Q9H379 93 aa8.48□□□□□ -1.05
LINC00396-201ENST00000411690 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
LINC00396-201ENST00000411690 RRP7AQ9Y3A4 280 aaKnown RBP8.48□□□□□ -1.05
LINC00396-201ENST00000411690 ZNF609O15014 1411 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 A0A1W2PPC1 479 aa8.47□□□□□ -1.05
LINC00396-201ENST00000411690 SOX1O00570 391 aaPredicted RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms