RNA–Protein interactions for RNA: ENST00000411553.3

HCG11-201, Transcript of HLA complex group 11, humanhuman

BASIC

Gene HCG11, Length 5,696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG11-201ENST00000411553 ZBTB21Q9ULJ3 1066 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 CWF19L2Q2TBE0 894 aaKnown RBP20.78■□□□□ 0.92
HCG11-201ENST00000411553 RBM17Q96I25 401 aaKnown RBP20.78■□□□□ 0.92
HCG11-201ENST00000411553 NEK11Q8NG66 645 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 PAIP2Q9BPZ3 127 aaKnown RBP20.78■□□□□ 0.92
HCG11-201ENST00000411553 DNAI1Q9UI46 699 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 PCDHB15Q9Y5E8 787 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 APOBRQ0VD83 1088 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 CHST3Q7LGC8 479 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 FBF1Q8TES7 1133 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 TTC6Q86TZ1 520 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 NSRP1Q9H0G5 558 aaKnown RBP20.78■□□□□ 0.92
HCG11-201ENST00000411553 WWC3Q9ULE0 1092 aa20.78■□□□□ 0.92
HCG11-201ENST00000411553 SYT1P21579 422 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 PLCB3Q01970 1234 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 KIF5AQ12840 1032 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 PRIMPOLQ96LW4 560 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 RBM28Q9NW13 759 aaKnown RBP20.77■□□□□ 0.92
HCG11-201ENST00000411553 CEP83Q9Y592 693 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 LMOD1P29536 600 aaPredicted RBP20.77■□□□□ 0.92
HCG11-201ENST00000411553 DTHD1Q6ZMT9 781 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 NAP1L4Q99733 375 aaKnown RBP20.77■□□□□ 0.92
HCG11-201ENST00000411553 CCDC42Q96M95 316 aa20.77■□□□□ 0.92
HCG11-201ENST00000411553 BACH1O14867 736 aa20.77■□□□□ 0.91
HCG11-201ENST00000411553 KRT86O43790 486 aa20.77■□□□□ 0.91
HCG11-201ENST00000411553 RAB3IL1Q8TBN0 382 aa20.77■□□□□ 0.91
HCG11-201ENST00000411553 PCDH11XQ9BZA7 1347 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 PCDH11YQ9BZA8 1340 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 CREB3L3Q68CJ9 461 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 CCDC186Q7Z3E2 898 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 SH2D4AQ9H788 454 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 PARP1P09874 1014 aaKnown RBP20.76■□□□□ 0.91
HCG11-201ENST00000411553 STMN4Q9H169 189 aaPredicted RBP20.76■□□□□ 0.91
HCG11-201ENST00000411553 NDC80O14777 642 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 UBXN1Q04323 297 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 POLKQ9UBT6 870 aa20.76■□□□□ 0.91
HCG11-201ENST00000411553 DHX32Q7L7V1 743 aaKnown RBP20.75■□□□□ 0.91
HCG11-201ENST00000411553 C19orf44Q9H6X5 657 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 DENND2AQ9ULE3 1009 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 CTAGE9A4FU28 777 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 AKNAD1Q5T1N1 836 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 BRAPQ7Z569 592 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 MXRA7P84157 204 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 TAF12Q16514 161 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 TRAPPC3LQ5T215 181 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 TEX14Q8IWB6 1497 aa20.75■□□□□ 0.91
HCG11-201ENST00000411553 ZRANB1Q9UGI0 708 aa20.74■□□□□ 0.91
HCG11-201ENST00000411553 SERPINA10Q9UK55 444 aa20.74■□□□□ 0.91
HCG11-201ENST00000411553 PTPDC1A2A3K4 754 aa20.74■□□□□ 0.91
HCG11-201ENST00000411553 URB2Q14146 1524 aaKnown RBP20.74■□□□□ 0.91
HCG11-201ENST00000411553 CEP85Q6P2H3 762 aa20.74■□□□□ 0.91
HCG11-201ENST00000411553 JAG2Q9Y219 1238 aa20.74■□□□□ 0.91
HCG11-201ENST00000411553 SP4Q02446 784 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 CCDC63Q8NA47 563 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 ARFGAP3Q9NP61 516 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 RAD50Q92878 1312 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 AK2P54819 239 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 APBB1IPQ7Z5R6 666 aaPredicted RBP20.73■□□□□ 0.91
HCG11-201ENST00000411553 GNPATO15228 680 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 ECM2O94769 699 aaPredicted RBP20.73■□□□□ 0.91
HCG11-201ENST00000411553 STX17P56962 302 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 IQUBQ8NA54 791 aa20.73■□□□□ 0.91
HCG11-201ENST00000411553 ZNF830Q96NB3 372 aaPredicted RBP20.73■□□□□ 0.91
HCG11-201ENST00000411553 OPA1O60313 960 aa20.72■□□□□ 0.91
HCG11-201ENST00000411553 RPL13P26373 211 aaKnown RBP20.72■□□□□ 0.91
HCG11-201ENST00000411553 ATP2C2O75185 946 aa20.72■□□□□ 0.91
HCG11-201ENST00000411553 BICC1Q9H694 974 aaKnown RBP20.72■□□□□ 0.91
HCG11-201ENST00000411553 ATP6V0A2Q9Y487 856 aa20.72■□□□□ 0.91
HCG11-201ENST00000411553 RNMTO43148 476 aaKnown RBP20.72■□□□□ 0.91
HCG11-201ENST00000411553 TUBB4AP04350 444 aa20.72■□□□□ 0.91
HCG11-201ENST00000411553 RUFY3Q7L099 469 aa20.72■□□□□ 0.91
HCG11-201ENST00000411553 GCP02774 474 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 PLCD3Q8N3E9 789 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 SNX21Q969T3 373 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 DCTPP1Q9H773 170 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 MBD4O95243 580 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 TEX11Q8IYF3 940 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.71■□□□□ 0.91
HCG11-201ENST00000411553 RXRAP19793 462 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 CNBD1Q8NA66 436 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
HCG11-201ENST00000411553 PLIN2Q99541 437 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 HELLSQ9NRZ9 838 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 KIAA1524Q8TCG1 905 aa20.71■□□□□ 0.91
HCG11-201ENST00000411553 DDX23Q9BUQ8 820 aaKnown RBP20.71■□□□□ 0.91
HCG11-201ENST00000411553 TYRO3Q06418 890 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 PKNOX2Q96KN3 472 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 A2MP01023 1474 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 HSPA4P34932 840 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 RAB3GAP1Q15042 981 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 DYNC1I1O14576 645 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 SPATA24Q86W54 205 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 FMNL3Q8IVF7 1028 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 TTC14Q96N46 770 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 TRERF1Q96PN7 1200 aa20.7■□□□□ 0.9
HCG11-201ENST00000411553 SRRTQ9BXP5 876 aaKnown RBP20.7■□□□□ 0.9
HCG11-201ENST00000411553 DUOX2Q9NRD8 1548 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms