RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 NECAB3Q96P71 396 aaPredicted RBP0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 FHDC1Q9C0D6 1143 aaPredicted RBP0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 USP40Q9NVE5 1235 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 PTGFRNQ9P2B2 879 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 IRAK3Q9Y616 596 aa0.57□□□□□ -2.32
RNU4-88P-201ENST00000411220 TEX51A0A1B0GUA7 166 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 MYOCOSA0A1B0GUC4 107 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 PEX10O60683 326 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 CPB1P15086 417 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 CD68P34810 354 aaPredicted RBP0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 ZP2Q05996 745 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 DUOXA2Q1HG44 320 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 FDX2Q6P4F2 183 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 ELMSAN1Q6PJG2 1045 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 ZBTB33Q86T24 672 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 AGAP2Q99490 1192 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 RAB6BQ9NRW1 208 aa0.56□□□□□ -2.32
RNU4-88P-201ENST00000411220 LOC100289279A0A1B0GTE1 492 aa0.55□□□□□ -2.32
RNU4-88P-201ENST00000411220 IL2RAP01589 272 aa0.55□□□□□ -2.32
RNU4-88P-201ENST00000411220 PERM1Q5SV97 790 aa0.55□□□□□ -2.32
RNU4-88P-201ENST00000411220 SGPP1Q9BX95 441 aa0.55□□□□□ -2.32
RNU4-88P-201ENST00000411220 TATP17735 454 aaPredicted RBP0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 GDNFP39905 211 aa0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 MVKQ03426 396 aa0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 SCRN1Q12765 414 aa0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 PCSK7Q16549 785 aa0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 PPARGC1BQ86YN6 1023 aaKnown RBP0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 GALNT11Q8NCW6 608 aa0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 KCNH4Q9UQ05 1017 aa0.54□□□□□ -2.32
RNU4-88P-201ENST00000411220 ECM2O94769 699 aaPredicted RBP0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 ZNF37AP17032 561 aaPredicted RBP0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 TNFRSF1BP20333 461 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 CNR2P34972 360 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 ERVK-9P63128 1117 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 IFI16Q16666 785 aaKnown RBP0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 NBPF1Q3BBV0 1214 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 CC2D2BQ6DHV5 1058 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 SYCE2Q6PIF2 218 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 SEPT12Q8IYM1 358 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 ABHD4Q8TB40 342 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 TMEM255BQ8WV15 326 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 KCNK4Q9NYG8 393 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 ST6GALNAC2Q9UJ37 374 aa0.53□□□□□ -2.32
RNU4-88P-201ENST00000411220 PRR23D1E9PI22 279 aaPredicted RBP0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 KCNAB3O43448 404 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 ZNF202O95125 648 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 PRR23D2P0DMB1 279 aaPredicted RBP0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 BMP5P22003 454 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 MCM7P33993 719 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 MTMR2Q13614 643 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 IL22RA1Q8N6P7 574 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 TP53I13Q8NBR0 393 aaPredicted RBP0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 SCARB1Q8WTV0 552 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 RNF208Q9H0X6 261 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 C19orf73Q9NVV2 129 aa0.52□□□□□ -2.33
RNU4-88P-201ENST00000411220 TMEM265A0A087WTH1 108 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 FBLN1P23142 703 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 IKZF1Q13422 519 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 FBXL22Q6P050 247 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 PDXDC2PQ6P474 469 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 ZNF605Q86T29 641 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 Q8N9P0 234 aaPredicted RBP0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 FBLIM1Q8WUP2 373 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 FUBP1Q96AE4 644 aaKnown RBP0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 DMRT1Q9Y5R6 373 aa0.51□□□□□ -2.33
RNU4-88P-201ENST00000411220 NUTM2FA1L443 756 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 IRS4O14654 1257 aaPredicted RBP0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 GNRH1P01148 92 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 CCKBRP32239 447 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 SLURP1P55000 103 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 COL9A2Q14055 689 aaPredicted RBP0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 BICDL1Q6ZP65 573 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 CADPS2Q86UW7 1296 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 LDLRAD3Q86YD5 345 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 KLHL23Q8NBE8 558 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 KLC2Q9H0B6 622 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 SMG9Q9H0W8 520 aaKnown RBP0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 MUC3BQ9H195 1237 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 ZNF768Q9H5H4 540 aaKnown RBP0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 EFCC1Q9HA90 598 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 EPB41L4AQ9HCS5 686 aaPredicted RBP0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 ZDHHC3Q9NYG2 299 aa0.5□□□□□ -2.33
RNU4-88P-201ENST00000411220 AZU1P20160 251 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 USP11P51784 963 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 SSBP2P81877 361 aaPredicted RBP0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 FHL3Q13643 280 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 NT5DC1Q5TFE4 455 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 IGFL4Q6B9Z1 124 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 DLK2Q6UY11 383 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 FAM181AQ8N9Y4 354 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 UBASH3BQ8TF42 649 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 XAGE2Q96GT9 111 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 YIPF2Q9BWQ6 316 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 LGR6Q9HBX8 967 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 ARIH1Q9Y4X5 557 aaPredicted RBP0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 DUSP10Q9Y6W6 482 aa0.49□□□□□ -2.33
RNU4-88P-201ENST00000411220 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
RNU4-88P-201ENST00000411220 RAC2P15153 192 aa0.48□□□□□ -2.33
RNU4-88P-201ENST00000411220 DAB2P98082 770 aa0.48□□□□□ -2.33
RNU4-88P-201ENST00000411220 CYP27C1Q4G0S4 372 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms