RNA–Protein interactions for RNA: ENST00000409889.1

CCDC148-203, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best) BASIC

Gene CCDC148, Length 1,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-203ENST00000409889 PRO3102Q9H379 93 aa13.73□□□□□ -0.21
CCDC148-203ENST00000409889 PCCAP05165 728 aaPredicted RBP13.72□□□□□ -0.21
CCDC148-203ENST00000409889 DLGAP5Q15398 846 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 TAF1CQ15572 869 aaPredicted RBP13.72□□□□□ -0.21
CCDC148-203ENST00000409889 SUPT20HL1Q3ZLR7 823 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 RIC3Q7Z5B4 369 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 TXNRD3Q86VQ6 643 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 ANKRD13AQ8IZ07 590 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 OPTNQ96CV9 577 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 CDC5LQ99459 802 aaKnown RBP13.72□□□□□ -0.21
CCDC148-203ENST00000409889 HYPKQ9NX55 129 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 MINPP1Q9UNW1 487 aa13.72□□□□□ -0.21
CCDC148-203ENST00000409889 ZNF804BA4D1E1 1349 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 GTF2IP78347 998 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 LMOD3Q0VAK6 560 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 NBPF12Q5TAG4 269 aaPredicted RBP13.71□□□□□ -0.21
CCDC148-203ENST00000409889 JARID2Q92833 1246 aaPredicted RBP13.71□□□□□ -0.21
CCDC148-203ENST00000409889 MYD88Q99836 296 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 ELP3Q9H9T3 547 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 ZFYVE28Q9HCC9 887 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.21
CCDC148-203ENST00000409889 VCANP13611 3396 aa13.71□□□□□ -0.21
CCDC148-203ENST00000409889 CLRN2A0PK11 232 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 USP2O75604 605 aaPredicted RBP13.7□□□□□ -0.22
CCDC148-203ENST00000409889 HOXB7P09629 217 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 GOLGA2Q08379 1002 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 ARHGAP39Q9C0H5 1083 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 VEZTQ9HBM0 779 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 LAS1LQ9Y4W2 734 aaKnown RBP13.7□□□□□ -0.22
CCDC148-203ENST00000409889 PCDHAC2Q9Y5I4 1007 aa13.7□□□□□ -0.22
CCDC148-203ENST00000409889 CCL15-CCL14A0A0B4J2E2 113 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 CHL1O00533 1208 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
CCDC148-203ENST00000409889 MYO1BO43795 1136 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 KLRK1P26718 216 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 TMPOP42166 694 aaKnown RBP13.69□□□□□ -0.22
CCDC148-203ENST00000409889 CTSWP56202 376 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 MTFR1Q15390 333 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 CCL15Q16663 113 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 MTMR14Q8NCE2 650 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 LRCH3Q96II8 777 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 HTATIP2Q9BUP3 242 aa13.69□□□□□ -0.22
CCDC148-203ENST00000409889 CWC25Q9NXE8 425 aaPredicted RBP13.69□□□□□ -0.22
CCDC148-203ENST00000409889 ARAP2Q8WZ64 1704 aa13.68□□□□□ -0.22
CCDC148-203ENST00000409889 A0A1W2PPC1 479 aa13.68□□□□□ -0.22
CCDC148-203ENST00000409889 KIF22Q14807 665 aa13.68□□□□□ -0.22
CCDC148-203ENST00000409889 FAM43AQ8N2R8 423 aa13.68□□□□□ -0.22
CCDC148-203ENST00000409889 LEMD3Q9Y2U8 911 aa13.68□□□□□ -0.22
CCDC148-203ENST00000409889 NR2E3Q9Y5X4 410 aa13.68□□□□□ -0.22
CCDC148-203ENST00000409889 SPTBN5Q9NRC6 3674 aaKnown RBP13.68□□□□□ -0.22
CCDC148-203ENST00000409889 SPDYE2BA6NHP3 402 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 SPDYE6P0CI01 402 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 GTF2A2P52657 109 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
CCDC148-203ENST00000409889 CFAP100Q494V2 611 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 UBE2Q1Q7Z7E8 422 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 CERS5Q8N5B7 392 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 NKX2-3Q8TAU0 364 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 GREM2Q9H772 168 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
CCDC148-203ENST00000409889 A0A1B0GUL6 1792 aa13.67□□□□□ -0.22
CCDC148-203ENST00000409889 AOX1Q06278 1338 aa13.66□□□□□ -0.22
CCDC148-203ENST00000409889 F8W031 263 aaPredicted RBP13.66□□□□□ -0.22
CCDC148-203ENST00000409889 ZBTB7BO15156 539 aaPredicted RBP13.66□□□□□ -0.22
CCDC148-203ENST00000409889 TLR2O60603 784 aa13.66□□□□□ -0.22
CCDC148-203ENST00000409889 GNRH1P01148 92 aa13.66□□□□□ -0.22
CCDC148-203ENST00000409889 RASA3Q14644 834 aa13.66□□□□□ -0.22
CCDC148-203ENST00000409889 TTLL11Q8NHH1 800 aa13.66□□□□□ -0.22
CCDC148-203ENST00000409889 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
CCDC148-203ENST00000409889 WDHD1O75717 1129 aaPredicted RBP13.65□□□□□ -0.22
CCDC148-203ENST00000409889 ECM2O94769 699 aaPredicted RBP13.65□□□□□ -0.22
CCDC148-203ENST00000409889 GJA8P48165 433 aa13.65□□□□□ -0.22
CCDC148-203ENST00000409889 PRMT2P55345 433 aa13.65□□□□□ -0.22
CCDC148-203ENST00000409889 VGLL4Q14135 290 aa13.65□□□□□ -0.22
CCDC148-203ENST00000409889 NEUROD2Q15784 382 aa13.65□□□□□ -0.22
CCDC148-203ENST00000409889 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.65□□□□□ -0.22
CCDC148-203ENST00000409889 PRMT6Q96LA8 375 aaPredicted RBP13.65□□□□□ -0.22
CCDC148-203ENST00000409889 ALPK3Q96L96 1907 aa13.64□□□□□ -0.23
CCDC148-203ENST00000409889 ABCB7O75027 752 aa13.64□□□□□ -0.23
CCDC148-203ENST00000409889 IGHMBP2P38935 993 aaKnown RBP13.64□□□□□ -0.23
CCDC148-203ENST00000409889 DUSP27Q5VZP5 1158 aa13.64□□□□□ -0.23
CCDC148-203ENST00000409889 CD209Q9NNX6 404 aa13.64□□□□□ -0.23
CCDC148-203ENST00000409889 GJB1P08034 283 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 CCL5P13501 91 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 KCNJ4P48050 445 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 RBM5P52756 815 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC148-203ENST00000409889 TNFAIP1Q13829 316 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 CDAN1Q8IWY9 1227 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
CCDC148-203ENST00000409889 ANKRD2Q9GZV1 360 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 MGAMO43451 1857 aa13.63□□□□□ -0.23
CCDC148-203ENST00000409889 EYSQ5T1H1 3165 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 EVI5O60447 810 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 FARP2O94887 1054 aaPredicted RBP13.62□□□□□ -0.23
CCDC148-203ENST00000409889 GRK4P32298 578 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 RAET1EQ8TD07 263 aa13.62□□□□□ -0.23
CCDC148-203ENST00000409889 RNF208Q9H0X6 261 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms