RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 TNS3Q68CZ2 1445 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 FOXP2O15409 715 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 LRRC8AQ8IWT6 810 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 CEP126Q9P2H0 1117 aa17.72■□□□□ 0.43
LYSMD4-204ENST00000409796 SMTNL1A8MU46 457 aa17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 ADORA1P30542 326 aa17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 TPD52L1Q16890 204 aaPredicted RBP17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 EVCP57679 992 aa17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 FMR1NBQ8N0W7 255 aaPredicted RBP17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 FBXL16Q8N461 479 aa17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 MRPS27Q92552 414 aaKnown RBP17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 ATG3Q9NT62 314 aa17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 RTEL1Q9NZ71 1219 aa17.71■□□□□ 0.43
LYSMD4-204ENST00000409796 KCPQ6ZWJ8 1503 aa17.71■□□□□ 0.42
LYSMD4-204ENST00000409796 UBAP1LF5GYI3 381 aa17.7■□□□□ 0.42
LYSMD4-204ENST00000409796 WASHC4Q2M389 1173 aa17.7■□□□□ 0.42
LYSMD4-204ENST00000409796 FBXW7Q969H0 707 aa17.7■□□□□ 0.42
LYSMD4-204ENST00000409796 A0A1B0GVL5 298 aa17.7■□□□□ 0.42
LYSMD4-204ENST00000409796 TTC39AQ5SRH9 613 aa17.7■□□□□ 0.42
LYSMD4-204ENST00000409796 AOPEPQ8N6M6 819 aa17.7■□□□□ 0.42
LYSMD4-204ENST00000409796 CCDC158Q5M9N0 1113 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 CHMP4CQ96CF2 233 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 CLIC4Q9Y696 253 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 KIF20AO95235 890 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 SCARF1Q14162 830 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 HSP90AB3PQ58FF7 597 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 GORABQ5T7V8 394 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 ADALQ6DHV7 355 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 CEP57L1Q8IYX8 460 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 ZCRB1Q8TBF4 217 aaKnown RBP17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 XAGE2Q96GT9 111 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 CTNNA3Q9UI47 895 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
LYSMD4-204ENST00000409796 PRC1O43663 620 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 IMMTQ16891 758 aaKnown RBP17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 RAB11FIP4Q86YS3 637 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 LINC00301Q8NCQ3 95 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 KLF18A0A0U1RQI7 1052 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 USP27XA6NNY8 438 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 FGAP02671 866 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 POLR3DP05423 398 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 NDUFA8P51970 172 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 RBM6P78332 1123 aaKnown RBP17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 NCBP1Q09161 790 aaKnown RBP17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 CCDC57Q2TAC2 916 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 MB21D2Q8IYB1 491 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 C8orf76Q96K31 380 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 HPS5Q9UPZ3 1129 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 MYH7P12883 1935 aa17.68■□□□□ 0.42
LYSMD4-204ENST00000409796 CPDO75976 1380 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 A0A1W2PQ27 194 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 A0A1W2PQ64 194 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 A0A1W2PQD8 194 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 ERVV-2B6SEH9 535 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 NEMFO60524 1076 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 STK38Q15208 465 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 SDF4Q9BRK5 362 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 ISCA1Q9BUE6 129 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 SPATA31A3Q5VYP0 1347 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 PAPPAQ13219 1627 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 CCDC69A6NI79 296 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 GJB4Q9NTQ9 266 aa17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 ORC3Q9UBD5 711 aaPredicted RBP17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 DDX60Q8IY21 1712 aaKnown RBP17.67■□□□□ 0.42
LYSMD4-204ENST00000409796 GOLGA8BA8MQT2 603 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 ZFYP08048 801 aaPredicted RBP17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 SKILP12757 684 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 ZAP70P43403 619 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 ANTXR2P58335 489 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 SF3A1Q15459 793 aaKnown RBP17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 LRRFIP1Q32MZ4 808 aaKnown RBP17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 PUS7LQ9H0K6 701 aaKnown RBP17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 PAXBP1Q9Y5B6 917 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 CCZ1BP86790 482 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 CCZ1P86791 482 aaPredicted RBP17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 CEP135Q66GS9 1140 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 FBXO18Q8NFZ0 1043 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 AKAP2Q9Y2D5 859 aa17.66■□□□□ 0.42
LYSMD4-204ENST00000409796 PI16Q6UXB8 463 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 CCDC112Q8NEF3 446 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 ZNF592Q92610 1267 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 APPBP2Q92624 585 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 NAT10Q9H0A0 1025 aaKnown RBP17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 U2AF2P26368 475 aaKnown RBP eCLIP17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 TCIRG1Q13488 830 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 MYSM1Q5VVJ2 828 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 TOM1L2Q6ZVM7 507 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 NEDD4P46934 1319 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 SPDYE4A6NLX3 237 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 YEATS4O95619 227 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 NAA30Q147X3 362 aaPredicted RBP17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 SYCP1Q15431 976 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 NCOA7Q8NI08 942 aa17.65■□□□□ 0.42
LYSMD4-204ENST00000409796 KCNG4Q8TDN1 519 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms