RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 FAM13AO94988 1023 aa28.52■■■□□ 2.16
SPIRE1-202ENST00000409402 NAP1L4Q99733 375 aaKnown RBP28.52■■■□□ 2.16
SPIRE1-202ENST00000409402 COMMD10Q9Y6G5 202 aa28.52■■■□□ 2.16
SPIRE1-202ENST00000409402 MARCKSP29966 332 aaPredicted RBP28.52■■■□□ 2.16
SPIRE1-202ENST00000409402 COL17A1Q9UMD9 1497 aaPredicted RBP28.51■■■□□ 2.16
SPIRE1-202ENST00000409402 SAP30BPQ9UHR5 308 aaKnown RBP28.51■■■□□ 2.15
SPIRE1-202ENST00000409402 DHX32Q7L7V1 743 aaKnown RBP28.51■■■□□ 2.15
SPIRE1-202ENST00000409402 EIF6P56537 245 aaKnown RBP28.51■■■□□ 2.15
SPIRE1-202ENST00000409402 CHST3Q7LGC8 479 aa28.51■■■□□ 2.15
SPIRE1-202ENST00000409402 RAB3GAP1Q15042 981 aa28.51■■■□□ 2.15
SPIRE1-202ENST00000409402 EHBP1Q8NDI1 1231 aa28.51■■■□□ 2.15
SPIRE1-202ENST00000409402 MAP2K1Q02750 393 aaPredicted RBP28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 SUPT20HQ8NEM7 779 aa28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 TMX1Q9H3N1 280 aa28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 TMOD4Q9NZQ9 345 aa28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 APOBRQ0VD83 1088 aa28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 DPP8Q6V1X1 898 aaPredicted RBP28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 IL13P35225 146 aa28.5■■■□□ 2.15
SPIRE1-202ENST00000409402 A0A1B0GUL7 405 aa28.49■■■□□ 2.15
SPIRE1-202ENST00000409402 UVSSAQ2YD98 709 aa28.49■■■□□ 2.15
SPIRE1-202ENST00000409402 MAPKBP1O60336 1514 aa28.49■■■□□ 2.15
SPIRE1-202ENST00000409402 ADCY5O95622 1261 aa28.49■■■□□ 2.15
SPIRE1-202ENST00000409402 PLVAPQ9BX97 442 aa28.49■■■□□ 2.15
SPIRE1-202ENST00000409402 DHX58Q96C10 678 aa28.49■■■□□ 2.15
SPIRE1-202ENST00000409402 PDCL2Q8N4E4 241 aa28.48■■■□□ 2.15
SPIRE1-202ENST00000409402 CNPY2Q9Y2B0 182 aa28.48■■■□□ 2.15
SPIRE1-202ENST00000409402 HLTFQ14527 1009 aaKnown RBP eCLIP28.48■■■□□ 2.15
SPIRE1-202ENST00000409402 CERS3Q8IU89 383 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 ARHGEF10LQ9HCE6 1279 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 SPTLC2O15270 562 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 UBASH3AP57075 661 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 LARGE2Q8N3Y3 721 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 GTPBP4Q9BZE4 634 aaKnown RBP28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 ECM2O94769 699 aaPredicted RBP28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 BACH1O14867 736 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 F13A1P00488 732 aa28.47■■■□□ 2.15
SPIRE1-202ENST00000409402 WDR66Q8TBY9 1149 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 HOOK2Q96ED9 719 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 POTEB2H3BUK9 544 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 APBA3O96018 575 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 MCM7P33993 719 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 BIN2Q9UBW5 565 aaPredicted RBP28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 KLHL40Q2TBA0 621 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 MRVI1Q9Y6F6 885 aa28.46■■■□□ 2.15
SPIRE1-202ENST00000409402 PABPN1LA6NDY0 278 aaKnown RBP28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 LMAN1P49257 510 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 GIMAP6Q6P9H5 292 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 LRRC45Q96CN5 670 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 ZBTB40Q9NUA8 1239 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 ZBTB21Q9ULJ3 1066 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 TNNI3KQ59H18 835 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 JADE2Q9NQC1 790 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 FPGT-TNNI3KV9GXZ4 949 aa28.45■■■□□ 2.15
SPIRE1-202ENST00000409402 BAG6P46379 1132 aa28.45■■■□□ 2.14
SPIRE1-202ENST00000409402 CYLC1P35663 651 aaPredicted RBP28.45■■■□□ 2.14
SPIRE1-202ENST00000409402 HS2ST1Q7LGA3 356 aa28.45■■■□□ 2.14
SPIRE1-202ENST00000409402 A1BGP04217 495 aa28.44■■■□□ 2.14
SPIRE1-202ENST00000409402 PDE6BP35913 854 aa28.44■■■□□ 2.14
SPIRE1-202ENST00000409402 SPECC1Q5M775 1068 aa28.44■■■□□ 2.14
SPIRE1-202ENST00000409402 RUFY3Q7L099 469 aa28.44■■■□□ 2.14
SPIRE1-202ENST00000409402 TTC12Q9H892 705 aaPredicted RBP28.44■■■□□ 2.14
SPIRE1-202ENST00000409402 DTHD1Q6ZMT9 781 aa28.44■■■□□ 2.14
SPIRE1-202ENST00000409402 PTPDC1A2A3K4 754 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 XAGE2Q96GT9 111 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 LGR6Q9HBX8 967 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 TIMM10P62072 90 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 G2E3Q7L622 706 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 AK2P54819 239 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 BRAPQ7Z569 592 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 KAT6BQ8WYB5 2073 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 BCCIPQ9P287 314 aaKnown RBP eCLIP28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 TNNQ9UQP3 1299 aa28.43■■■□□ 2.14
SPIRE1-202ENST00000409402 CFAP43Q8NDM7 1665 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 FAM212AQ96EL1 285 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 ZKSCAN3Q9BRR0 538 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 RTL1A6NKG5 1358 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 DDX17Q92841 729 aaKnown RBP28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 BICDL2A1A5D9 508 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 KIF4AO95239 1232 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 CHMLP26374 656 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 TMEM2Q9UHN6 1383 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 SNW1Q13573 536 aaKnown RBP28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 SMC1AQ14683 1233 aaKnown RBP28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 USP48Q86UV5 1035 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 PLCD4Q9BRC7 762 aa28.42■■■□□ 2.14
SPIRE1-202ENST00000409402 ZNF354CQ86Y25 554 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 C16orf45Q96MC5 204 aaPredicted RBP28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 SHTN1A0MZ66 631 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 SP4Q02446 784 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 DNAJC10Q8IXB1 793 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 ZNF408Q9H9D4 720 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 APBB1IPQ7Z5R6 666 aaPredicted RBP28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 GPCPD1Q9NPB8 672 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 GOLGA6L10A0A0M3HER8 536 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 PLEKHM2Q8IWE5 1019 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 RXRAP19793 462 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 KIAA0753Q2KHM9 967 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 ARMT1Q9H993 441 aa28.41■■■□□ 2.14
SPIRE1-202ENST00000409402 STAMBPO95630 424 aa28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms