RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 PDIA4P13667 645 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 SLC5A1P13866 664 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 FGFR2P21802 821 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 GTF2E1P29083 439 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 DEKP35659 375 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 AK2P54819 239 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 ADCK5Q3MIX3 580 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 BLOC1S2Q6QNY1 142 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 ZGPATQ8N5A5 531 aaKnown RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.49□□□□□ -1.21
GTF3C3-202ENST00000409364 GNPATO15228 680 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 CYP2E1P05181 493 aaPredicted RBP7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 HMGB1P09429 215 aaKnown RBP7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 ZAP70P43403 619 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 TRAPPC3LQ5T215 181 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 FAM196AQ6ZSG2 479 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 PTF1AQ7RTS3 328 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 ILDR1Q86SU0 546 aaPredicted RBP7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 SEC62Q99442 399 aaKnown RBP7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 SEC31BQ9NQW1 1179 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 CTNNA3Q9UI47 895 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 DOT1LQ8TEK3 1739 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 TUBGCP6Q96RT7 1819 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 WNK3Q9BYP7 1800 aa7.48□□□□□ -1.21
GTF3C3-202ENST00000409364 ATRNO75882 1429 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 LOC100996750A0A140TA64 210 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 TRAK2O60296 914 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 ARID4AP29374 1257 aaPredicted RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 RFC4P35249 363 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 KCNQ4P56696 695 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 FAM182BQ5T319 152 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 CCDC102BQ68D86 513 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 NOL8Q76FK4 1167 aaKnown RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 ANKRD18AQ8IVF6 992 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 NLRP3Q96P20 1036 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 NEK1Q96PY6 1258 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 KRTAP4-6Q9BYQ5 205 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 BSDC1Q9NW68 430 aaPredicted RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 TJP1Q07157 1748 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 BAG4O95429 457 aaKnown RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 HSPD1P10809 573 aaKnown RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 RPS6KB1P23443 525 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 MCAMP43121 646 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 UBE3CQ15386 1083 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 WASHC4Q2M389 1173 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 ERFEQ4G0M1 354 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 TBC1D9BQ66K14 1250 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 BICDL1Q6ZP65 573 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 CCDC129Q6ZRS4 1044 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 NBPF5PQ86XG9 351 aaPredicted RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 HELBQ8NG08 1087 aaPredicted RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 APPBP2Q92624 585 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 ARHGEF1Q92888 912 aaKnown RBP7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 OSBP2Q969R2 916 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 BCL2L12Q9HB09 334 aa7.47□□□□□ -1.21
GTF3C3-202ENST00000409364 CICQ96RK0 1608 aaPredicted RBP7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 BRD1O95696 1058 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 CYP21A2P08686 494 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 PHKA1P46020 1223 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 CHRNDQ07001 517 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 UBE4AQ14139 1066 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 SCARF1Q14162 830 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 SLC27A3Q5K4L6 730 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 SLC9C2Q5TAH2 1124 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 TRAF7Q6Q0C0 670 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 CHMP4CQ96CF2 233 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 GNL3LQ9NVN8 582 aaKnown RBP7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 SMC3Q9UQE7 1217 aa7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 RPAP1Q9BWH6 1393 aaPredicted RBP7.46□□□□□ -1.22
GTF3C3-202ENST00000409364 MAST3O60307 1309 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 WDR33Q9C0J8 1336 aaKnown RBP7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 RIC1Q4ADV7 1423 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 CHGBP05060 677 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 CPA1P15085 419 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 ADD2P35612 726 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 RPS8P62241 208 aaKnown RBP7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 MAP3K12Q12852 859 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 DHX32Q7L7V1 743 aaKnown RBP7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 KRT27Q7Z3Y8 459 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 SPATA5Q8NB90 893 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 RGS17Q9UGC6 210 aaPredicted RBP7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 SRP68Q9UHB9 627 aaKnown RBP7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 ZDHHC9Q9Y397 364 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 ZNF831Q5JPB2 1677 aa7.45□□□□□ -1.22
GTF3C3-202ENST00000409364 PLCB2Q00722 1185 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 PKP1Q13835 747 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 ME3Q16798 604 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 IMMTQ16891 758 aaKnown RBP7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 CAVIN4Q5BKX8 364 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 ANKRD2Q9GZV1 360 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 TPCN1Q9ULQ1 816 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 PCDHB8Q9UN66 801 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 MINPP1Q9UNW1 487 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 ATP6V1DQ9Y5K8 247 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 RREB1Q92766 1687 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 NUP98P52948 1817 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 M0R2C6 588 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 NPHP1O15259 732 aa7.44□□□□□ -1.22
GTF3C3-202ENST00000409364 IDH1O75874 414 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms