RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 COL6A3P12111 3177 aa16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 USP2O75604 605 aaPredicted RBP16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 IREB2P48200 963 aaKnown RBP16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 SLC4A8Q2Y0W8 1093 aa16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 CHRDL2Q6WN34 429 aa16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 NBPF11Q86T75 865 aa16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 ANKRD13AQ8IZ07 590 aa16.61■□□□□ 0.25
CHRNA1-203ENST00000409219 LAMA3Q16787 3333 aa16.6■□□□□ 0.25
CHRNA1-203ENST00000409219 AOX1Q06278 1338 aa16.6■□□□□ 0.25
CHRNA1-203ENST00000409219 SUPT20HL1Q3ZLR7 823 aa16.6■□□□□ 0.25
CHRNA1-203ENST00000409219 MS4A4AQ96JQ5 239 aa16.6■□□□□ 0.25
CHRNA1-203ENST00000409219 SPDYE2BA6NHP3 402 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 SPDYE6P0CI01 402 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 OPTNQ96CV9 577 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 ELP3Q9H9T3 547 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 VEZTQ9HBM0 779 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 CD209Q9NNX6 404 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 MAP3K2Q9Y2U5 619 aa16.59■□□□□ 0.25
CHRNA1-203ENST00000409219 ELL2O00472 640 aaPredicted RBP16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 DDX58O95786 925 aaKnown RBP16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 IGHMBP2P38935 993 aaKnown RBP16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 CFAP100Q494V2 611 aa16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 BRI3BPQ8WY22 251 aa16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 RUNDC1Q96C34 613 aa16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 RBM27Q9P2N5 1060 aaKnown RBP16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 IRS2Q9Y4H2 1338 aa16.58■□□□□ 0.24
CHRNA1-203ENST00000409219 F8W031 263 aaPredicted RBP16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 MYO1BO43795 1136 aa16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 ZNF853P0CG23 659 aa16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 TAF1CQ15572 869 aaPredicted RBP16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 SH3TC2Q8TF17 1288 aa16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 ARAP2Q8WZ64 1704 aa16.57■□□□□ 0.24
CHRNA1-203ENST00000409219 RASA3Q14644 834 aa16.56■□□□□ 0.24
CHRNA1-203ENST00000409219 ARHGEF6Q15052 776 aa16.56■□□□□ 0.24
CHRNA1-203ENST00000409219 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
CHRNA1-203ENST00000409219 SHISA4Q96DD7 197 aa16.56■□□□□ 0.24
CHRNA1-203ENST00000409219 ANKRD2Q9GZV1 360 aa16.56■□□□□ 0.24
CHRNA1-203ENST00000409219 SNAP23O00161 211 aa16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 DLL1O00548 723 aa16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 ITGA6P23229 1130 aa16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 CHRNDQ07001 517 aa16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 CWF19L2Q2TBE0 894 aaKnown RBP16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 FAM43AQ8N2R8 423 aa16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 ZFYVE28Q9HCC9 887 aa16.55■□□□□ 0.24
CHRNA1-203ENST00000409219 CCL15-CCL14A0A0B4J2E2 113 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 KCNJ4P48050 445 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 CCL15Q16663 113 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 ARHGAP39Q9C0H5 1083 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 PI4KAP2A4QPH2 592 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 NEURL1BA8MQ27 555 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 KSR2Q6VAB6 950 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 CDAN1Q8IWY9 1227 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 PI4KAP1Q8N8J0 262 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 MPHOSPH8Q99549 860 aa16.54■□□□□ 0.24
CHRNA1-203ENST00000409219 A0A0C4DFX4 3053 aa16.53■□□□□ 0.24
CHRNA1-203ENST00000409219 VGLL4Q14135 290 aa16.53■□□□□ 0.24
CHRNA1-203ENST00000409219 RALBP1Q15311 655 aa16.53■□□□□ 0.24
CHRNA1-203ENST00000409219 C8orf58Q8NAV2 365 aa16.53■□□□□ 0.24
CHRNA1-203ENST00000409219 PRO3102Q9H379 93 aa16.53■□□□□ 0.24
CHRNA1-203ENST00000409219 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
CHRNA1-203ENST00000409219 GTF2A2P52657 109 aa16.52■□□□□ 0.23
CHRNA1-203ENST00000409219 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.23
CHRNA1-203ENST00000409219 C15orf52Q6ZUT6 534 aaKnown RBP16.52■□□□□ 0.23
CHRNA1-203ENST00000409219 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.23
CHRNA1-203ENST00000409219 PLA2G12BQ9BX93 195 aa16.52■□□□□ 0.23
CHRNA1-203ENST00000409219 JAG2Q9Y219 1238 aa16.52■□□□□ 0.23
CHRNA1-203ENST00000409219 H7C1W4 665 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 IL1R1P14778 569 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 RBM5P52756 815 aaKnown RBP eCLIP16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 LACTBP83111 547 aaPredicted RBP16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 TNFAIP1Q13829 316 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 MTFR1Q15390 333 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 TEPSINQ96N21 525 aa16.51■□□□□ 0.23
CHRNA1-203ENST00000409219 TLR2O60603 784 aa16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 TAF5LO75529 589 aa16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 GNAI1P63096 354 aa16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 WDR43Q15061 677 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 ZNF804AQ7Z570 1209 aa16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 DPF3Q92784 378 aa16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 CUL9Q8IWT3 2517 aa16.5■□□□□ 0.23
CHRNA1-203ENST00000409219 CSF1RP07333 972 aa16.49■□□□□ 0.23
CHRNA1-203ENST00000409219 CASP7P55210 303 aa16.49■□□□□ 0.23
CHRNA1-203ENST00000409219 HELBQ8NG08 1087 aaPredicted RBP16.49■□□□□ 0.23
CHRNA1-203ENST00000409219 ZNF70Q9UC06 446 aaPredicted RBP16.49■□□□□ 0.23
CHRNA1-203ENST00000409219 ADAMTS8Q9UP79 889 aa16.49■□□□□ 0.23
CHRNA1-203ENST00000409219 MYBBP1AQ9BQG0 1328 aaKnown RBP16.49■□□□□ 0.23
CHRNA1-203ENST00000409219 KIF22Q14807 665 aa16.48■□□□□ 0.23
CHRNA1-203ENST00000409219 UBE2Q1Q7Z7E8 422 aa16.48■□□□□ 0.23
CHRNA1-203ENST00000409219 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
CHRNA1-203ENST00000409219 TDRD3Q9H7E2 651 aaKnown RBP16.48■□□□□ 0.23
CHRNA1-203ENST00000409219 SPDYE5A6NIY4 337 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms