RNA–Protein interactions for RNA: ENST00000408580.1

RNU6ATAC40P-201, Transcript of RNA, U6atac small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6ATAC40P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC40P-201ENST00000408580 UBTFL1P0CB47 393 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CHGAP10645 457 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TOP1P11387 765 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CPA1P15085 419 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MNAT1P51948 309 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 UBASH3AP57075 661 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 GNG11P61952 73 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PIP4K2BP78356 416 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 IRX1P78414 480 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PTH1RQ03431 593 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TBX2Q13207 712 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 NEDD9Q14511 834 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MCM6Q14566 821 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CASP8Q14790 479 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PLCB4Q15147 1175 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 E2F4Q16254 413 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 C11orf91Q3C1V1 193 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FOXR1Q6PIV2 292 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SLC4A10Q6U841 1118 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 AEBP2Q6ZN18 517 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 B4GALNT4Q76KP1 1039 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 G2E3Q7L622 706 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 YTHDF3Q7Z739 585 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ARHGEF25Q86VW2 580 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FMNL3Q8IVF7 1028 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ELOA2Q8IYF1 753 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 AFAP1Q8N556 730 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FSIP1Q8NA03 581 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PRPF38AQ8NAV1 312 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CCDC12Q8WUD4 166 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 RUBCNQ92622 972 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 BRF1Q92994 677 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 DHX58Q96C10 678 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CABS1Q96KC9 395 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 BAG1Q99933 345 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SDF4Q9BRK5 362 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 LARP6Q9BRS8 491 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PAGR1Q9BTK6 254 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 GOLPH3LQ9H4A5 285 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 BICC1Q9H694 974 aaKnown RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FAM204AQ9H8W3 233 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ABCB6Q9NP58 842 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ECHDC1Q9NTX5 307 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 BSDC1Q9NW68 430 aaPredicted RBP3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 RTEL1Q9NZ71 1219 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MYO1AQ9UBC5 1043 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TUBE1Q9UJT0 475 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SPG7Q9UQ90 795 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MLH3Q9UHC1 1453 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ECM29Q5VYK3 1845 aa3.54□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 KDM6AO15550 1401 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 NCAPD2Q15021 1401 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 POGZQ7Z3K3 1410 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 C4AP0C0L4 1744 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 C4BP0C0L5 1744 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PEAK1Q9H792 1746 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MED23Q9ULK4 1368 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TOPAZ1Q8N9V7 1692 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CDHR2Q9BYE9 1310 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FAM237AA0A1B0GTK4 181 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SHTN1A0MZ66 631 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 NUTM2FA1L443 756 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 TARSL2A2RTX5 802 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CTAGE15A4D2H0 777 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SRRM3A6NNA2 597 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 F6X3S4 739 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 EXOC5O00471 708 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 KIF5CO60282 957 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PFKFB2O60825 505 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 RNF40O75150 1001 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SURF6O75683 361 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 WDHD1O75717 1129 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ALDH1L1O75891 902 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CLSTN1O94985 981 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SYF2O95926 243 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SERPINC1P01008 464 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 SLC3A2P08195 630 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 HMGB1P09429 215 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PRR29P0C7W0 189 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CTAGE8P0CG41 777 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 HSP90B1P14625 803 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 GCFC2P16383 781 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 GPTP24298 496 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 INPP5BP32019 993 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ELF1P32519 619 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 RDXP35241 583 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 ARHGAP25P42331 645 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MRPL12P52815 198 aaKnown RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FBLN2P98095 1184 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MYL5Q02045 173 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 FLIIQ13045 1269 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PPFIA1Q13136 1202 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 DRP2Q13474 957 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 MTX1Q13505 466 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 CRYMQ14894 314 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 DPCR1Q3MIW9 517 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 PREPLQ4J6C6 727 aaPredicted RBP3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 WLSQ5T9L3 541 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 LRCH2Q5VUJ6 765 aa3.53□□□□□ -1.84
RNU6ATAC40P-201ENST00000408580 NUTM2GQ5VZR2 741 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms