RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 NMIQ13287 307 aaPredicted RBP14.64□□□□□ -0.07
RNF43-201ENST00000407977 RAB11FIP4Q86YS3 637 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 GRM8O00222 908 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 CEP85Q6P2H3 762 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 LMNTD2Q8IXW0 634 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 KIAA1524Q8TCG1 905 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 NKIRAS1Q9NYS0 192 aa14.64□□□□□ -0.07
RNF43-201ENST00000407977 ATP11AP98196 1134 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 NAA25Q14CX7 972 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 LRRC2Q9BYS8 371 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 TOPBP1Q92547 1522 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 VWA3BQ502W6 1294 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 INTS8Q75QN2 995 aaKnown RBP14.63□□□□□ -0.07
RNF43-201ENST00000407977 CLSTN2Q9H4D0 955 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 KRT79Q5XKE5 535 aa14.63□□□□□ -0.07
RNF43-201ENST00000407977 LLPHQ9BRT6 129 aaKnown RBP14.63□□□□□ -0.07
RNF43-201ENST00000407977 PUS7Q96PZ0 661 aaKnown RBP14.62□□□□□ -0.07
RNF43-201ENST00000407977 C6orf50Q9HD87 102 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 PHF8Q9UPP1 1060 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 KRT2P35908 639 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 KSR2Q6VAB6 950 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 CACNA2D3Q8IZS8 1091 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 VAT1LQ9HCJ6 419 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 ZNF75DP51815 510 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 RUFY4Q6ZNE9 571 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 ZBTB3Q9H5J0 574 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 CABP5Q9NP86 173 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 PIK3C2GO75747 1445 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 ARHGAP6O43182 974 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 IGSF3O75054 1194 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 GSTA5Q7RTV2 222 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 STMN2Q93045 179 aa14.62□□□□□ -0.07
RNF43-201ENST00000407977 ATP2B3Q16720 1220 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 CYP26C1Q6V0L0 522 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 FAM83GA6ND36 823 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 GOLGA6CA6NDK9 693 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 PPFIA3O75145 1194 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 WDHD1O75717 1129 aaPredicted RBP14.61□□□□□ -0.07
RNF43-201ENST00000407977 GOLGA6DP0CG33 693 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 GOLGA6AQ9NYA3 693 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.61□□□□□ -0.071e-12■■□□□ 13.6
RNF43-201ENST00000407977 PAG1Q9NWQ8 432 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 HDAC9Q9UKV0 1011 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 ARHGEF11O15085 1522 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 TLDC2A0PJX2 215 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 PABPN1LA6NDY0 278 aaKnown RBP14.61□□□□□ -0.07
RNF43-201ENST00000407977 HS2ST1Q7LGA3 356 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 DDX23Q9BUQ8 820 aaKnown RBP14.61□□□□□ -0.07
RNF43-201ENST00000407977 STX8Q9UNK0 236 aa14.61□□□□□ -0.07
RNF43-201ENST00000407977 RNF113AO15541 343 aaKnown RBP14.6□□□□□ -0.07
RNF43-201ENST00000407977 ACTN4O43707 911 aaKnown RBP14.6□□□□□ -0.07
RNF43-201ENST00000407977 PPFIA1Q13136 1202 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 RILPL1Q5EBL4 403 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 IFT20Q8IY31 132 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 GPR161Q8N6U8 529 aaKnown RBP14.6□□□□□ -0.07
RNF43-201ENST00000407977 SYNCQ9H7C4 482 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 MRC2Q9UBG0 1479 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 IGSF22Q8N9C0 903 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 LINS1Q8NG48 757 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 ATP6V0A2Q9Y487 856 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 SLC4A4Q9Y6R1 1079 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 AOX1Q06278 1338 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 MAP7D1Q3KQU3 841 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 C8orf74Q6P047 294 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 C16orf71Q8IYS4 520 aaPredicted RBP14.6□□□□□ -0.07
RNF43-201ENST00000407977 TSPY3P0CV98 308 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 TSPY8P0CW00 308 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 TMTC1Q8IUR5 882 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 RAB3IL1Q8TBN0 382 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 RPGRIP1Q96KN7 1286 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 NUP58Q9BVL2 599 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 IMPG2Q9BZV3 1241 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 KCNK9Q9NPC2 374 aa14.6□□□□□ -0.07
RNF43-201ENST00000407977 ATP5J2-PTCD1G3V325 749 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 CIB2O75838 187 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 RPL13P26373 211 aaKnown RBP14.59□□□□□ -0.07
RNF43-201ENST00000407977 MLKLQ8NB16 471 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 PPP1R9BQ96SB3 815 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 SEC62Q99442 399 aaKnown RBP14.59□□□□□ -0.07
RNF43-201ENST00000407977 CSRNP2Q9H175 543 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 SAMM50Q9Y512 469 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 KIF14Q15058 1648 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 BICD1Q96G01 975 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 STX17P56962 302 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 DTHD1Q6ZMT9 781 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 UBLCP1Q8WVY7 318 aaPredicted RBP14.59□□□□□ -0.07
RNF43-201ENST00000407977 NAP1L4Q99733 375 aaKnown RBP14.59□□□□□ -0.07
RNF43-201ENST00000407977 PPP1R7Q15435 360 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 CLUL1Q15846 466 aa14.59□□□□□ -0.07
RNF43-201ENST00000407977 VAMP4O75379 141 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 GNA11P29992 359 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 NAPAP54920 295 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 CCDC152Q4G0S7 254 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 SEL1L2Q5TEA6 688 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 HEATR3Q7Z4Q2 680 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 CARD6Q9BX69 1037 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 SSX2IPQ9Y2D8 614 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 MRVI1Q9Y6F6 885 aa14.58□□□□□ -0.07
RNF43-201ENST00000407977 IQGAP2Q13576 1575 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms